Information for 4-GGCGGGCAGACAC (Motif 10)

C T A G A T C G A G T C A C T G A C T G A C T G A G T C C T G A A C T G C T G A A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A G C T A G T C A G C T A C T G A G T C A G T C A G T C A C T G A T G C A G T C
p-value:1e-9
log p-value:-2.189e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.0 +/- 28.4bp
Average Position of motif in Background79.2 +/- 9.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGCGGGCAGACAC
TNNGGGCAG----
 C T A G A T C G A G T C A C T G A C T G A C T G A G T C C T G A A C T G C T G A A G T C C G T A A G T C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGCGGGCAGACAC
GGGCGGGAAGG---
 A C G T C T A G A T C G A G T C A C T G A C T G A C T G A G T C C T G A A C T G C T G A A G T C C G T A A G T C
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GGCGGGCAGACAC--
-----CCAGACRSVB
 C T A G A T C G A G T C A C T G A C T G A C T G A G T C C T G A A C T G C T G A A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGCGGGCAGACAC
CWGGCGGGAA-----
 A C G T A C G T C T A G A T C G A G T C A C T G A C T G A C T G A G T C C T G A A C T G C T G A A G T C C G T A A G T C
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGCGGGCAGACAC
GGGCGGGAAGG---
 A C G T C T A G A T C G A G T C A C T G A C T G A C T G A G T C C T G A A C T G C T G A A G T C C G T A A G T C
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GGCGGGCAGACAC
-----CCAGACAG
 C T A G A T C G A G T C A C T G A C T G A C T G A G T C C T G A A C T G C T G A A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GGCGGGCAGACAC
BTKGGCGGGAAA----
 A C G T A C G T A C G T C T A G A T C G A G T C A C T G A C T G A C T G A G T C C T G A A C T G C T G A A G T C C G T A A G T C
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGCGGGCAGACAC
NGTGGGCAT----
 C T A G A T C G A G T C A C T G A C T G A C T G A G T C C T G A A C T G C T G A A G T C C G T A A G T C
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GGCGGGCAGACAC
NAGANTGGCGGGGNGNA--
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A T C G A G T C A C T G A C T G A C T G A G T C C T G A A C T G C T G A A G T C C G T A A G T C
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GGCGGGCAGACAC
-----BCAGACWA
 C T A G A T C G A G T C A C T G A C T G A C T G A G T C C T G A A C T G C T G A A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A