Information for 9-CCAAGTGDTTTGC (Motif 13)

A G T C G A T C T C G A C G T A T C A G A C G T A C T G C A T G C G A T A C G T C G A T A C T G T G A C
Reverse Opposite:
A C T G G T A C C G T A G T C A C G T A G A T C A G T C G T C A A G T C G C A T A G C T C A T G A C T G
p-value:1e-9
log p-value:-2.140e+01
Information Content per bp:1.716
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif69.0
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets48.9 +/- 30.1bp
Average Position of motif in Background51.1 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCAAGTGDTTTGC
TTRAGTGSYK---
 A G T C G A T C T C G A C G T A T C A G A C G T A C T G C A T G C G A T A C G T C G A T A C T G T G A C
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCAAGTGDTTTGC
CCATGTGCTT---
 A G T C G A T C T C G A C G T A T C A G A C G T A C T G C A T G C G A T A C G T C G A T A C T G T G A C
T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CCAAGTGDTTTGC
--CNGTGATTTN-
 A G T C G A T C T C G A C G T A T C A G A C G T A C T G C A T G C G A T A C G T C G A T A C T G T G A C
A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCAAGTGDTTTGC
TTAAGTGCTT---
 A G T C G A T C T C G A C G T A T C A G A C G T A C T G C A T G C G A T A C G T C G A T A C T G T G A C
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCAAGTGDTTTGC
NTCAAGTGGN----
 A C G T A G T C G A T C T C G A C G T A T C A G A C G T A C T G C A T G C G A T A C G T C G A T A C T G T G A C
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCAAGTGDTTTGC----
NNCTTTGTTTTGNTNNN
 A G T C G A T C T C G A C G T A T C A G A C G T A C T G C A T G C G A T A C G T C G A T A C T G T G A C A C G T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCAAGTGDTTTGC
TTAAGTGGT----
 A G T C G A T C T C G A C G T A T C A G A C G T A C T G C A T G C G A T A C G T C G A T A C T G T G A C
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T A C G T A C G T

MAX::MYC/MA0059.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCAAGTGDTTTGC
ACCACGTGCTC---
 A C G T A G T C G A T C T C G A C G T A T C A G A C G T A C T G C A T G C G A T A C G T C G A T A C T G T G A C
C T G A A G T C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T G A T C A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCAAGTGDTTTGC
TTAAGTGGN----
 A G T C G A T C T C G A C G T A T C A G A C G T A C T G C A T G C G A T A C G T C G A T A C T G T G A C
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T A C G T A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCAAGTGDTTTGC
-TAATTGATTA--
 A G T C G A T C T C G A C G T A T C A G A C G T A C T G C A T G C G A T A C G T C G A T A C T G T G A C
A C G T C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A A C G T A C G T