Information for 5-GTTGGCTCTTTGC (Motif 8)

A C T G A G C T A C G T A C T G A C T G A T G C A G C T A G T C C G A T G C A T A C G T A C T G G T A C
Reverse Opposite:
A C T G A G T C C G T A C G T A C G T A C T A G C T G A A T C G G T A C G T A C C G T A C T G A G T A C
p-value:1e-10
log p-value:-2.510e+01
Information Content per bp:1.821
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif22.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets56.3 +/- 24.4bp
Average Position of motif in Background48.1 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTTGGCTCTTTGC--
-TTGGCATGGTGCCA
 A C T G A G C T A C G T A C T G A C T G A T G C A G C T A G T C C G A T G C A T A C G T A C T G G T A C A C G T A C G T
A C G T G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTTGGCTCTTTGC---
CTTGGCANNNTGCCAA
 A C T G A G C T A C G T A C T G A C T G A T G C A G C T A G T C C G A T G C A T A C G T A C T G G T A C A C G T A C G T A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GTTGGCTCTTTGC
-TTGGCA------
 A C T G A G C T A C G T A C T G A C T G A T G C A G C T A G T C C G A T G C A T A C G T A C T G G T A C
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTTGGCTCTTTGC
NTTGGCANN----
 A C T G A G C T A C G T A C T G A C T G A T G C A G C T A G T C C G A T G C A T A C G T A C T G G T A C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTTGGCTCTTTGC
GGTTGGCAT-----
 A C G T A C T G A G C T A C G T A C T G A C T G A T G C A G C T A G T C C G A T G C A T A C G T A C T G G T A C
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GTTGGCTCTTTGC
-TTGACTTTT---
 A C T G A G C T A C G T A C T G A C T G A T G C A G C T A G T C C G A T G C A T A C G T A C T G G T A C
A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:7
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----GTTGGCTCTTTGC
NGTAGGTTGGCATNNN--
 A C G T A C G T A C G T A C G T A C G T A C T G A G C T A C G T A C T G A C T G A T G C A G C T A G T C C G A T G C A T A C G T A C T G G T A C
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GTTGGCTCTTTGC--
-CTGGCAGNCTGCCA
 A C T G A G C T A C G T A C T G A C T G A T G C A G C T A G T C C G A T G C A T A C G T A C T G G T A C A C G T A C G T
A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

Rarg/MA0859.1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GTTGGCTCTTTGC----
-TTGACCTTTTGACCTT
 A C T G A G C T A C G T A C T G A C T G A T G C A G C T A G T C C G A T G C A T A C G T A C T G G T A C A C G T A C G T A C G T A C G T
A C G T C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GTTGGCTCTTTGC
NNTTGGCANN----
 A C G T A C T G A G C T A C G T A C T G A C T G A T G C A G C T A G T C C G A T G C A T A C G T A C T G G T A C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T