Information for 11-TAAAATATATGAA (Motif 13)

A C G T C G T A C G T A C G T A C G T A A G C T C G T A A C G T C G T A A C G T A C T G C G T A C G T A
Reverse Opposite:
C G A T C G A T A G T C C G T A A C G T C G T A A C G T C T G A A C G T A C G T A C G T A C G T C G T A
p-value:1e-6
log p-value:-1.504e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets22.8 +/- 14.3bp
Average Position of motif in Background61.3 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BHLHE23/MA0817.1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TAAAATATATGAA-
--AAACATATGTTT
 A C G T C G T A C G T A C G T A C G T A A G C T C G T A A C G T C G T A A C G T A C T G C G T A C G T A A C G T
A C G T A C G T C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T

OLIG1/MA0826.1/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TAAAATATATGAA
---AACATATGTT
 A C G T C G T A C G T A C G T A C G T A A G C T C G T A A C G T C G T A A C G T A C T G C G T A C G T A
A C G T A C G T A C G T T C G A T G C A G T A C C T G A A C G T T G C A G C A T A C T G A C G T G A C T

Atoh1/MA0461.2/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TAAAATATATGAA
---AACATATGTT
 A C G T C G T A C G T A C G T A C G T A A G C T C G T A A C G T C G T A A C G T A C T G C G T A C G T A
A C G T A C G T A C G T T C G A T G C A T G A C T C G A C A G T G T C A C G A T C A T G A C G T G A C T

PH0075.1_Hoxd10/Jaspar

Match Rank:4
Score:0.62
Offset:-7
Orientation:forward strand
Alignment:-------TAAAATATATGAA
AATGCAATAAAATTTAT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A G C T C G T A A C G T C G T A A C G T A C T G C G T A C G T A
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T A C G T A C G T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TAAAATATATGAA
---NACATATGGN
 A C G T C G T A C G T A C G T A C G T A A G C T C G T A A C G T C G T A A C G T A C T G C G T A C G T A
A C G T A C G T A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T

OLIG2/MA0678.1/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TAAAATATATGAA
---ACCATATGGT
 A C G T C G T A C G T A C G T A C G T A A G C T C G T A A C G T C G T A A C G T A C T G C G T A C G T A
A C G T A C G T A C G T C T G A T G A C T G A C C T G A A C G T T G C A G A C T C A T G A C T G G A C T

OLIG3/MA0827.1/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TAAAATATATGAA
---ACCATATGTT
 A C G T C G T A C G T A C G T A C G T A A G C T C G T A A C G T C G T A A C G T A C T G C G T A C G T A
A C G T A C G T A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A C G T G A C T

NEUROG2/MA0669.1/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TAAAATATATGAA
---AACATATGTC
 A C G T C G T A C G T A C G T A C G T A A G C T C G T A A C G T C G T A A C G T A C T G C G T A C G T A
A C G T A C G T A C G T T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C

BHLHE22/MA0818.1/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TAAAATATATGAA
---ACCATATGTT
 A C G T C G T A C G T A C G T A C G T A A G C T C G T A A C G T C G T A A C G T A C T G C G T A C G T A
A C G T A C G T A C G T T C G A T G A C G T A C C T G A A G C T G T C A G A C T A C T G A G C T G A C T

PB0080.1_Tbp_1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TAAAATATATGAA--
TCTTTATATATAAATA
 A C G T A C G T C G T A C G T A C G T A C G T A A G C T C G T A A C G T C G T A A C G T A C T G C G T A C G T A A C G T A C G T
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A