Information for 6-GGCAACAGAG (Motif 12)

A C T G A T C G G T A C C T G A T C G A G T A C G C T A T A C G G C T A T C A G
Reverse Opposite:
A G T C C G A T A T G C C G A T A C T G A G C T G A C T A C T G A T G C G T A C
p-value:1e-9
log p-value:-2.118e+01
Information Content per bp:1.778
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.40%
Number of Background Sequences with motif196.6
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets47.5 +/- 23.7bp
Average Position of motif in Background51.4 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GGCAACAGAG
SCCTAGCAACAG--
 A C G T A C G T A C G T A C G T A C T G A T C G G T A C C T G A T C G A G T A C G C T A T A C G G C T A T C A G
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGCAACAGAG
GTAAACAG--
 A C T G A T C G G T A C C T G A T C G A G T A C G C T A T A C G G C T A T C A G
C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGCAACAGAG
TGGAACAGMA
 A C T G A T C G G T A C C T G A T C G A G T A C G C T A T A C G G C T A T C A G
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGCAACAGAG-
-GGAACAAAGR
 A C T G A T C G G T A C C T G A T C G A G T A C G C T A T A C G G C T A T C A G A C G T
A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

Rfx1/MA0509.1/Jaspar

Match Rank:5
Score:0.59
Offset:-8
Orientation:forward strand
Alignment:--------GGCAACAGAG
GTTGCCATGGCAAC----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G G T A C C T G A T C G A G T A C G C T A T A C G G C T A T C A G
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T A C G T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGCAACAGAG
TTGCAACATN-
 A C G T A C T G A T C G G T A C C T G A T C G A G T A C G C T A T A C G G C T A T C A G
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGCAACAGAG--
ATGCAACAGGTGG
 A C G T A C T G A T C G G T A C C T G A T C G A G T A C G C T A T A C G G C T A T C A G A C G T A C G T
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

SOX10/MA0442.1/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GGCAACAGAG
----ACAAAG
 A C T G A T C G G T A C C T G A T C G A G T A C G C T A T A C G G C T A T C A G
A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

Spz1/MA0111.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGCAACAGAG
AGGGTAACAGC-
 A C G T A C G T A C T G A T C G G T A C C T G A T C G A G T A C G C T A T A C G G C T A T C A G
C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGCAACAGAG-
-VRRACAAWGG
 A C T G A T C G G T A C C T G A T C G A G T A C G C T A T A C G G C T A T C A G A C G T
A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G