Information for 3-ACCAGGGACATTCATT (Motif 7)

C G T A A G T C G T A C G T C A C T A G A C T G A C T G C G T A T A G C C G T A A C G T C A G T A G T C G T C A A G C T A C G T
Reverse Opposite:
C G T A C T G A A C G T A C T G G C T A C G T A A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C T G A C G T
p-value:1e-10
log p-value:-2.472e+01
Information Content per bp:1.906
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.2 +/- 23.6bp
Average Position of motif in Background70.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.59
Offset:7
Orientation:forward strand
Alignment:ACCAGGGACATTCATT-----
-------ACATTCATGACACG
 C G T A A G T C G T A C G T C A C T A G A C T G A C T G C G T A T A G C C G T A A C G T C A G T A G T C G T C A A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

PB0028.1_Hbp1_1/Jaspar

Match Rank:2
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:ACCAGGGACATTCATT------
------NNCATTCATTCATNNN
 C G T A A G T C G T A C G T C A C T A G A C T G A C T G C G T A T A G C C G T A A C G T C A G T A G T C G T C A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ACCAGGGACATTCATT
-CCAGGAACAG-----
 C G T A A G T C G T A C G T C A C T A G A C T G A C T G C G T A T A G C C G T A A C G T C A G T A G T C G T C A A G C T A C G T
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:4
Score:0.56
Offset:6
Orientation:forward strand
Alignment:ACCAGGGACATTCATT
------CACATTCCAT
 C G T A A G T C G T A C G T C A C T A G A C T G A C T G C G T A T A G C C G T A A C G T C A G T A G T C G T C A A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ACCAGGGACATTCATT
CTCATGAATATTCAT-
 C G T A A G T C G T A C G T C A C T A G A C T G A C T G C G T A T A G C C G T A A C G T C A G T A G T C G T C A A G C T A C G T
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:6
Score:0.54
Offset:6
Orientation:forward strand
Alignment:ACCAGGGACATTCATT
------CACATTCCAT
 C G T A A G T C G T A C G T C A C T A G A C T G A C T G C G T A T A G C C G T A A C G T C A G T A G T C G T C A A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:7
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:ACCAGGGACATTCATT
-----GHATATKCAT-
 C G T A A G T C G T A C G T C A C T A G A C T G A C T G C G T A T A G C C G T A A C G T C A G T A G T C G T C A A G C T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:8
Score:0.53
Offset:7
Orientation:forward strand
Alignment:ACCAGGGACATTCATT
-------ACATTCCA-
 C G T A A G T C G T A C G T C A C T A G A C T G A C T G C G T A T A G C C G T A A C G T C A G T A G T C G T C A A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A A C G T

REL/MA0101.1/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:ACCAGGGACATTCATT
----GGGGATTTCC--
 C G T A A G T C G T A C G T C A C T A G A C T G A C T G C G T A T A G C C G T A A C G T C A G T A G T C G T C A A G C T A C G T
A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:ACCAGGGACATTCATT
--CAAGGHCANV----
 C G T A A G T C G T A C G T C A C T A G A C T G A C T G C G T A T A G C C G T A A C G T C A G T A G T C G T C A A G C T A C G T
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T