Information for 9-CCGAGCGCTA (Motif 11)

A G T C A T G C C A T G C T G A T C A G T A G C A C T G G T A C A C G T C G T A
Reverse Opposite:
G C A T T G C A A C T G T G A C A T C G A G T C A G C T G T A C T A C G C T A G
p-value:1e-8
log p-value:-2.053e+01
Information Content per bp:1.684
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif3.91%
Number of Background Sequences with motif558.9
Percentage of Background Sequences with motif1.17%
Average Position of motif in Targets42.6 +/- 25.0bp
Average Position of motif in Background50.6 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCGAGCGCTA
CGGAGC----
 A G T C A T G C C A T G C T G A T C A G T A G C A C T G G T A C A C G T C G T A
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCGAGCGCTA
GAGSCCGAGC----
 A C G T A C G T A C G T A C G T A G T C A T G C C A T G C T G A T C A G T A G C A C T G G T A C A C G T C G T A
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCGAGCGCTA----
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A G T C A T G C C A T G C T G A T C A G T A G C A C T G G T A C A C G T C G T A A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCGAGCGCTA
--CAGCC---
 A G T C A T G C C A T G C T G A T C A G T A G C A C T G G T A C A C G T C G T A
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:5
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CCGAGCGCTA
CCGCCCAAGGGCAG
 A C G T A C G T A C G T A C G T A G T C A T G C C A T G C T G A T C A G T A G C A C T G G T A C A C G T C G T A
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CCGAGCGCTA-
---AGGCCTNG
 A G T C A T G C C A T G C T G A T C A G T A G C A C T G G T A C A C G T C G T A A C G T
A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:7
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CCGAGCGCTA
TTGCCCTAGGGCAT
 A C G T A C G T A C G T A C G T A G T C A T G C C A T G C T G A T C A G T A G C A C T G G T A C A C G T C G T A
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

Zfx/MA0146.2/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CCGAGCGCTA
GGGGCCGAGGCCTG
 A C G T A C G T A C G T A C G T A G T C A T G C C A T G C T G A T C A G T A G C A C T G G T A C A C G T C G T A
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CCGAGCGCTA
-CTAGGCCT-
 A G T C A T G C C A T G C T G A T C A G T A G C A C T G G T A C A C G T C G T A
A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T

POL001.1_MTE/Jaspar

Match Rank:10
Score:0.51
Offset:-7
Orientation:forward strand
Alignment:-------CCGAGCGCTA--
TTTCGAGCGGAACGGTCGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A T G C C A T G C T G A T C A G T A G C A C T G G T A C A C G T C G T A A C G T A C G T
A C G T G A C T A G C T A G T C C T A G C G T A C T A G A G T C A T C G T A C G C G T A C T A G A G T C A C T G A T C G C G A T G A T C T A C G A G C T