Information for 11-GCTTTDTRGT (Motif 15)

A T C G A G T C A C G T A C G T A C G T C A T G A G C T C T A G A C T G C G A T
Reverse Opposite:
G C T A G T A C A G T C C T G A G T A C C G T A C G T A G T C A A C T G A T G C
p-value:1e-9
log p-value:-2.083e+01
Information Content per bp:1.797
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.40%
Number of Background Sequences with motif209.6
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets48.8 +/- 31.0bp
Average Position of motif in Background54.2 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GCTTTDTRGT
-CTTTGT---
 A T C G A G T C A C G T A C G T A C G T C A T G A G C T C T A G A C T G C G A T
A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:2
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GCTTTDTRGT
AGGVNCCTTTGT---
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C A C G T A C G T A C G T C A T G A G C T C T A G A C T G C G A T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCTTTDTRGT-
DGWTTTATGRCN
 A C G T A T C G A G T C A C G T A C G T A C G T C A T G A G C T C T A G A C T G C G A T A C G T
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GCTTTDTRGT
CCWTTGTYYB
 A T C G A G T C A C G T A C G T A C G T C A T G A G C T C T A G A C T G C G A T
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCTTTDTRGT
CCWTTGTY--
 A T C G A G T C A C G T A C G T A C G T C A T G A G C T C T A G A C T G C G A T
A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GCTTTDTRGT
CCTTTGATGT
 A T C G A G T C A C G T A C G T A C G T C A T G A G C T C T A G A C T G C G A T
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCTTTDTRGT
CCTTTGTTTT
 A T C G A G T C A C G T A C G T A C G T C A T G A G C T C T A G A C T G C G A T
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCTTTDTRGT
CCTTTGAWGT
 A T C G A G T C A C G T A C G T A C G T C A T G A G C T C T A G A C T G C G A T
A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

CDX2/MA0465.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GCTTTDTRGT--
-TTTTATGGCTN
 A T C G A G T C A C G T A C G T A C G T C A T G A G C T C T A G A C T G C G A T A C G T A C G T
A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

PB0166.1_Sox12_2/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GCTTTDTRGT---
ANTCCTTTGTCTNNNN
 A C G T A C G T A C G T A T C G A G T C A C G T A C G T A C G T C A T G A G C T C T A G A C T G C G A T A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T