Information for 6-YAYCWCWCCTTTG (Motif 14)

A G C T G C T A A G T C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A C G T A A C T G A C T G C G A T A C T G C G T A A C T G C T A G C A G T C T G A
p-value:1e-9
log p-value:-2.298e+01
Information Content per bp:1.873
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.0 +/- 23.5bp
Average Position of motif in Background31.4 +/- 11.3bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.66
Offset:7
Orientation:forward strand
Alignment:YAYCWCWCCTTTG--
-------CCTTTGTT
 A G C T G C T A A G T C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

TBX21/MA0690.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:YAYCWCWCCTTTG
-TTCACACCTT--
 A G C T G C T A A G T C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C T G
A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:YAYCWCWCCTTTG
--TCACACCT---
 A G C T G C T A A G T C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C T G
A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--YAYCWCWCCTTTG
NTTTTCACACCTT--
 A C G T A C G T A G C T G C T A A G T C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C T G
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.65
Offset:7
Orientation:forward strand
Alignment:YAYCWCWCCTTTG--
-------CCWTTGTY
 A G C T G C T A A G T C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

TBX1/MA0805.1/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:YAYCWCWCCTTTG
--TCACACCT---
 A G C T G C T A A G T C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C T G
A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:YAYCWCWCCTTTG
--TCACACCT---
 A G C T G C T A A G T C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C T G
A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.64
Offset:7
Orientation:forward strand
Alignment:YAYCWCWCCTTTG----
-------CCTTTGTTTT
 A G C T G C T A A G T C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:YAYCWCWCCTTTG
---CTGACCTTTG
 A G C T G C T A A G T C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C T G
A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

TBX20/MA0689.1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:YAYCWCWCCTTTG
CTTCACACCTA--
 A G C T G C T A A G T C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C T G
A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A A C G T A C G T