Information for 17-CCTTTGTACCTGA (Motif 24)

A T G C A G T C A C G T A C G T A C G T A C T G A C G T C G T A A T G C A T G C A C G T A C T G C T G A
Reverse Opposite:
A G C T A G T C C G T A A T C G A T C G A C G T C G T A A G T C C G T A C G T A C G T A A C T G A T C G
p-value:1e-8
log p-value:-2.015e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.2 +/- 22.0bp
Average Position of motif in Background30.4 +/- 8.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CCTTTGTACCTGA
YCTTTGTTCC---
 A T G C A G T C A C G T A C G T A C G T A C T G A C G T C G T A A T G C A T G C A C G T A C T G C T G A
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CCTTTGTACCTGA
CCWTTGTYYB---
 A T G C A G T C A C G T A C G T A C G T A C T G A C G T C G T A A T G C A T G C A C G T A C T G C T G A
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCTTTGTACCTGA
CCTTTGTTTT---
 A T G C A G T C A C G T A C G T A C G T A C T G A C G T C G T A A T G C A T G C A C G T A C T G C T G A
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CCTTTGTACCTGA
-CTTTGT------
 A T G C A G T C A C G T A C G T A C G T A C T G A C G T C G T A A T G C A T G C A C G T A C T G C T G A
A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCTTTGTACCTGA
CCTTTGTT-----
 A T G C A G T C A C G T A C G T A C G T A C T G A C G T C G T A A T G C A T G C A C G T A C T G C T G A
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCTTTGTACCTGA
CCWTTGTY-----
 A T G C A G T C A C G T A C G T A C G T A C T G A C G T C G T A A T G C A T G C A C G T A C T G C T G A
A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:7
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CCTTTGTACCTGA
AGGVNCCTTTGT------
 A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G A C G T C G T A A T G C A T G C A C G T A C T G C T G A
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CCTTTGTACCTGA
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G A C G T C G T A A T G C A T G C A C G T A C T G C T G A
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0071.1_Sox4_1/Jaspar

Match Rank:9
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CCTTTGTACCTGA
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G A C G T C G T A A T G C A T G C A C G T A C T G C T G A
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCTTTGTACCTGA
NCCATTGTTC----
 A C G T A T G C A G T C A C G T A C G T A C G T A C T G A C G T C G T A A T G C A T G C A C G T A C T G C T G A
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T A C G T