Information for 9-GACTCTGCCCTGC (Motif 9)

A C T G G T C A A G T C A G C T A G T C C G A T A C T G G T A C A G T C A G T C A C G T A T C G A G T C
Reverse Opposite:
A C T G A T G C C G T A A C T G A C T G A C T G A G T C C G T A A C T G C T G A A C T G A C G T A G T C
p-value:1e-13
log p-value:-3.102e+01
Information Content per bp:1.904
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 17.0bp
Average Position of motif in Background53.5 +/- 8.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GACTCTGCCCTGC
TGACCTTGACCT--
 A C G T A C T G G T C A A G T C A G C T A G T C C G A T A C T G G T A C A G T C A G T C A C G T A T C G A G T C
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GACTCTGCCCTGC
ATTGGACTTTGACCCC-
 A C G T A C G T A C G T A C G T A C T G G T C A A G T C A G C T A G T C C G A T A C T G G T A C A G T C A G T C A C G T A T C G A G T C
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GACTCTGCCCTGC
TGACCTTTGCCCTA-
 A C G T A C G T A C T G G T C A A G T C A G C T A G T C C G A T A C T G G T A C A G T C A G T C A C G T A T C G A G T C
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GACTCTGCCCTGC
TGGACTTTGNNCTCN
 A C G T A C G T A C T G G T C A A G T C A G C T A G T C C G A T A C T G G T A C A G T C A G T C A C G T A T C G A G T C
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GACTCTGCCCTGC
----CTGCCCGCA
 A C T G G T C A A G T C A G C T A G T C C G A T A C T G G T A C A G T C A G T C A C G T A T C G A G T C
A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GACTCTGCCCTGC
TGACCTTGACCT--
 A C G T A C T G G T C A A G T C A G C T A G T C C G A T A C T G G T A C A G T C A G T C A C G T A T C G A G T C
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GACTCTGCCCTGC-
TGGACTTTGNNCTNTG
 A C G T A C G T A C T G G T C A A G T C A G C T A G T C C G A T A C T G G T A C A G T C A G T C A C G T A T C G A G T C A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GACTCTGCCCTGC
TGACCTTTGCCCTAN
 A C G T A C G T A C T G G T C A A G T C A G C T A G T C C G A T A C T G G T A C A G T C A G T C A C G T A T C G A G T C
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GACTCTGCCCTGC
AGGATGACTCAGCAC---
 A C G T A C G T A C G T A C G T A C G T A C T G G T C A A G T C A G C T A G T C C G A T A C T G G T A C A G T C A G T C A C G T A T C G A G T C
C T G A A T C G T A C G T C G A G C A T A C T G C G T A A T G C C A G T T G A C C T G A A T C G A G T C C G T A A T G C A C G T A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GACTCTGCCCTGC-
NRGCCCCRCCCHBNN
 A C G T A C T G G T C A A G T C A G C T A G T C C G A T A C T G G T A C A G T C A G T C A C G T A T C G A G T C A C G T
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C