Information for 3-CCACAAGATGGCGCYG (Motif 5)

A G T C A G T C C T G A A T G C C G T A C G T A A C T G C T G A A C G T A C T G A C T G A T G C A C T G T A G C A G T C A C T G
Reverse Opposite:
T A G C C T A G A T C G A G T C A T C G A G T C G T A C T G C A A G C T G T A C A C G T C G A T A T C G A G C T C T A G A C T G
p-value:1e-14
log p-value:-3.444e+01
Information Content per bp:1.796
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.5 +/- 27.8bp
Average Position of motif in Background68.2 +/- 11.9bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-CCACAAGATGGCGCYG---
GCCASCAGGGGGCGCYVNNG
 A C G T A G T C A G T C C T G A A T G C C G T A C G T A A C T G C T G A A C G T A C T G A C T G A T G C A C T G T A G C A G T C A C T G A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---CCACAAGATGGCGCYG
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A G T C A G T C C T G A A T G C C G T A C G T A A C T G C T G A A C G T A C T G A C T G A T G C A C T G T A G C A G T C A C T G
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---CCACAAGATGGCGCYG-
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A G T C A G T C C T G A A T G C C G T A C G T A A C T G C T G A A C G T A C T G A C T G A T G C A C T G T A G C A G T C A C T G A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.71
Offset:3
Orientation:forward strand
Alignment:CCACAAGATGGCGCYG
---CAAGATGGCGGC-
 A G T C A G T C C T G A A T G C C G T A C G T A A C T G C T G A A C G T A C T G A C T G A T G C A C T G T A G C A G T C A C T G
A C G T A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T

YY1/MA0095.2/Jaspar

Match Rank:5
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CCACAAGATGGCGCYG
---CAAGATGGCGGC-
 A G T C A G T C C T G A A T G C C G T A C G T A A C T G C T G A A C G T A C T G A C T G A T G C A C T G T A G C A G T C A C T G
A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCACAAGATGGCGCYG
NWAACCACADNN--------
 A C G T A C G T A C G T A C G T A G T C A G T C C T G A A T G C C G T A C G T A A C T G C T G A A C G T A C T G A C T G A T G C A C T G T A G C A G T C A C T G
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CCACAAGATGGCGCYG
AAACCACAGAN--------
 A C G T A C G T A C G T A G T C A G T C C T G A A T G C C G T A C G T A A C T G C T G A A C G T A C T G A C T G A T G C A C T G T A G C A G T C A C T G
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CCACAAGATGGCGCYG
AAACCGCAA----------
 A C G T A C G T A C G T A G T C A G T C C T G A A T G C C G T A C G T A A C T G C T G A A C G T A C T G A C T G A T G C A C T G T A G C A G T C A C T G
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CCACAAGATGGCGCYG
AAACCGCAAA---------
 A C G T A C G T A C G T A G T C A G T C C T G A A T G C C G T A C G T A A C T G C T G A A C G T A C T G A C T G A T G C A C T G T A G C A G T C A C T G
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CCACAAGATGGCGCYG
NAAACCACAG----------
 A C G T A C G T A C G T A C G T A G T C A G T C C T G A A T G C C G T A C G T A A C T G C T G A A C G T A C T G A C T G A T G C A C T G T A G C A G T C A C T G
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T