Information for 15-GTGTMWTCRAMRS (Motif 20)

C T A G A C G T A C T G A C G T T G A C C G A T A C G T A G T C C T G A G T C A G T C A C T A G A T G C
Reverse Opposite:
T A C G A G T C A C G T A C G T A G C T A C T G G T C A G C T A A C T G C G T A A G T C C G T A A G T C
p-value:1e-8
log p-value:-1.991e+01
Information Content per bp:1.805
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif19.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets56.9 +/- 26.9bp
Average Position of motif in Background48.5 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTGTMWTCRAMRS
TGTGGATTNNN---
 A C G T C T A G A C G T A C T G A C G T T G A C C G A T A C G T A G T C C T G A G T C A G T C A C T A G A T G C
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GTGTMWTCRAMRS
NNTGTGGATTSS----
 A C G T A C G T A C G T C T A G A C G T A C T G A C G T T G A C C G A T A C G T A G T C C T G A G T C A G T C A C T A G A T G C
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T A C G T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:3
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GTGTMWTCRAMRS
TNNNNGGTGTCATNTNT--
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C T G A C G T T G A C C G A T A C G T A G T C C T G A G T C A G T C A C T A G A T G C
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTGTMWTCRAMRS
AGGTGTGA-------
 A C G T A C G T C T A G A C G T A C T G A C G T T G A C C G A T A C G T A G T C C T G A G T C A G T C A C T A G A T G C
C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GTGTMWTCRAMRS
NTGTCAN------
 C T A G A C G T A C T G A C G T T G A C C G A T A C G T A G T C C T G A G T C A G T C A C T A G A T G C
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GTGTMWTCRAMRS
AGGTGTGA-------
 A C G T A C G T C T A G A C G T A C T G A C G T T G A C C G A T A C G T A G T C C T G A G T C A G T C A C T A G A T G C
C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GTGTMWTCRAMRS
AGGTGTCA-------
 A C G T A C G T C T A G A C G T A C T G A C G T T G A C C G A T A C G T A G T C C T G A G T C A G T C A C T A G A T G C
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GTGTMWTCRAMRS
---ACATCAAAGG
 C T A G A C G T A C T G A C G T T G A C C G A T A C G T A G T C C T G A G T C A G T C A C T A G A T G C
A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GTGTMWTCRAMRS
AGGTGTGAAM-----
 A C G T A C G T C T A G A C G T A C T G A C G T T G A C C G A T A C G T A G T C C T G A G T C A G T C A C T A G A T G C
C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T A C G T A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GTGTMWTCRAMRS
CCATTGTATGCAAAT-
 A C G T A C G T A C G T C T A G A C G T A C T G A C G T T G A C C G A T A C G T A G T C C T G A G T C A G T C A C T A G A T G C
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T A C G T