Information for 5-TGTTAACATT (Motif 3)

C G A T A T C G A G C T C G A T C G T A C T G A A G T C T G C A G C A T C G A T
Reverse Opposite:
G C T A C G T A A C G T T C A G A G C T G C A T G C T A C T G A A T G C G C T A
p-value:1e-18
log p-value:-4.252e+01
Information Content per bp:1.582
Number of Target Sequences with motif127.0
Percentage of Target Sequences with motif17.00%
Number of Background Sequences with motif3459.1
Percentage of Background Sequences with motif7.22%
Average Position of motif in Targets45.9 +/- 25.7bp
Average Position of motif in Background50.2 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0109.1_Bbx_2/Jaspar

Match Rank:1
Score:0.82
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTAACATT--
NNNNCTGTTAACNNTNN
 A C G T A C G T A C G T A C G T A C G T C G A T A T C G A G C T C G A T C G T A C T G A A G T C T G C A G C A T C G A T A C G T A C G T
A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A

Foxk1/MA0852.1/Jaspar

Match Rank:2
Score:0.81
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTAACATT--
NNNTTTGTTTACATTTN
 A C G T A C G T A C G T A C G T A C G T C G A T A T C G A G C T C G A T C G T A C T G A A G T C T G C A G C A T C G A T A C G T A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

PB0018.1_Foxk1_1/Jaspar

Match Rank:3
Score:0.81
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTAACATT--
NNNTTTGTTTACATTTN
 A C G T A C G T A C G T A C G T A C G T C G A T A T C G A G C T C G A T C G T A C T G A A G T C T G C A G C A T C G A T A C G T A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:4
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--TGTTAACATT
CBTGTTTAYAWW
 A C G T A C G T C G A T A T C G A G C T C G A T C G T A C T G A A G T C T G C A G C A T C G A T
A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:5
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--TGTTAACATT
CNTGTTTACATA
 A C G T A C G T C G A T A T C G A G C T C G A T C G T A C T G A A G T C T G C A G C A T C G A T
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:TGTTAACATT
TGTTTACTTT
 C G A T A T C G A G C T C G A T C G T A C T G A A G T C T G C A G C A T C G A T
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:7
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---TGTTAACATT
SCHTGTTTACAT-
 A C G T A C G T A C G T C G A T A T C G A G C T C G A T C G T A C T G A A G T C T G C A G C A T C G A T
T A C G T A G C G C T A C G A T C T A G A C G T C A G T C A G T G C T A A G T C G T C A G C A T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:8
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----TGTTAACATT-
TCCATGTTTACTTTG
 A C G T A C G T A C G T A C G T C G A T A T C G A G C T C G A T C G T A C T G A A G T C T G C A G C A T C G A T A C G T
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:9
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---TGTTAACATT--
BSNTGTTTACWYWGN
 A C G T A C G T A C G T C G A T A T C G A G C T C G A T C G T A C T G A A G T C T G C A G C A T C G A T A C G T A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

Foxa2/MA0047.2/Jaspar

Match Rank:10
Score:0.78
Offset:0
Orientation:forward strand
Alignment:TGTTAACATT--
TGTTTACTTAGG
 C G A T A T C G A G C T C G A T C G T A C T G A A G T C T G C A G C A T C G A T A C G T A C G T
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G