Information for 1-ARAGGTCAAAGKYCAN (Motif 1)

T C G A T C A G C T G A T C A G C A T G A C G T A G T C C T G A T C G A C T G A A C T G C A G T A G C T A G T C T C G A T G C A
Reverse Opposite:
A C G T A G C T T C A G T C G A G T C A T A G C G A C T A G C T A G C T T C A G T G C A G T A C A G T C G A C T A G T C A G C T
p-value:1e-269
log p-value:-6.211e+02
Information Content per bp:1.565
Number of Target Sequences with motif291.0
Percentage of Target Sequences with motif38.96%
Number of Background Sequences with motif1069.8
Percentage of Background Sequences with motif2.23%
Average Position of motif in Targets51.2 +/- 20.2bp
Average Position of motif in Background49.1 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4G/MA0484.1/Jaspar

Match Rank:1
Score:0.98
Offset:0
Orientation:forward strand
Alignment:ARAGGTCAAAGKYCAN
AGAGTCCAAAGTCCA-
 T C G A T C A G C T G A T C A G C A T G A C G T A G T C C T G A T C G A C T G A A C T G C A G T A G C T A G T C T C G A T G C A
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-ARAGGTCAAAGKYCAN
CANAGNNCAAAGTCCA-
 A C G T T C G A T C A G C T G A T C A G C A T G A C G T A G T C C T G A T C G A C T G A A C T G C A G T A G C T A G T C T C G A T G C A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:3
Score:0.89
Offset:1
Orientation:forward strand
Alignment:ARAGGTCAAAGKYCAN-
-GGGGTCAAAGTCCAAT
 T C G A T C A G C T G A T C A G C A T G A C G T A G T C C T G A T C G A C T G A A C T G C A G T A G C T A G T C T C G A T G C A A C G T
A C G T T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

RXRG/MA0856.1/Jaspar

Match Rank:4
Score:0.88
Offset:1
Orientation:forward strand
Alignment:ARAGGTCAAAGKYCAN
-GGGGTCAAAGGTCA-
 T C G A T C A G C T G A T C A G C A T G A C G T A G T C C T G A T C G A C T G A A C T G C A G T A G C T A G T C T C G A T G C A
A C G T T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:5
Score:0.88
Offset:1
Orientation:forward strand
Alignment:ARAGGTCAAAGKYCAN
-GAGGTCAAAGGTCA-
 T C G A T C A G C T G A T C A G C A T G A C G T A G T C C T G A T C G A C T G A A C T G C A G T A G C T A G T C T C G A T G C A
A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:6
Score:0.88
Offset:1
Orientation:forward strand
Alignment:ARAGGTCAAAGKYCAN
-GAGGTCAAAGGTCA-
 T C G A T C A G C T G A T C A G C A T G A C G T A G T C C T G A T C G A C T G A A C T G C A G T A G C T A G T C T C G A T G C A
A C G T T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A A C G T

Rxra/MA0512.2/Jaspar

Match Rank:7
Score:0.88
Offset:1
Orientation:forward strand
Alignment:ARAGGTCAAAGKYCAN
-GGGGTCAAAGGTCA-
 T C G A T C A G C T G A T C A G C A T G A C G T A G T C C T G A T C G A C T G A A C T G C A G T A G C T A G T C T C G A T G C A
A C G T T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A A C G T

RXRB/MA0855.1/Jaspar

Match Rank:8
Score:0.87
Offset:1
Orientation:forward strand
Alignment:ARAGGTCAAAGKYCAN
-GGGGTCAAAGGTCA-
 T C G A T C A G C T G A T C A G C A T G A C G T A G T C C T G A T C G A C T G A A C T G C A G T A G C T A G T C T C G A T G C A
A C G T T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:9
Score:0.85
Offset:0
Orientation:forward strand
Alignment:ARAGGTCAAAGKYCAN
AGGGGTCAGAGGTCA-
 T C G A T C A G C T G A T C A G C A T G A C G T A G T C C T G A T C G A C T G A A C T G C A G T A G C T A G T C T C G A T G C A
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:10
Score:0.85
Offset:0
Orientation:forward strand
Alignment:ARAGGTCAAAGKYCAN-
AAAGGTCAAAGGTCAAC
 T C G A T C A G C T G A T C A G C A T G A C G T A G T C C T G A T C G A C T G A A C T G C A G T A G C T A G T C T C G A T G C A A C G T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C