Information for 13-AATGACAAAG (Motif 21)

C G T A C G T A A C G T A C T G C G T A A G T C C G T A C T G A C G T A A C T G
Reverse Opposite:
A G T C A C G T A G C T A C G T A C T G A C G T A G T C C G T A A C G T A C G T
p-value:1e-6
log p-value:-1.473e+01
Information Content per bp:1.959
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.6 +/- 19.4bp
Average Position of motif in Background58.3 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:AATGACAAAG
-TTGACAG--
 C G T A C G T A A C G T A C T G C G T A A G T C C G T A C T G A C G T A A C T G
A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AATGACAAAG--
AAAAATAACAAACGG
 A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A A G T C C G T A C T G A C G T A A C T G A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AATGACAAAG
RHTGWCAR--
 C G T A C G T A A C G T A C T G C G T A A G T C C G T A C T G A C G T A A C T G
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AATGACAAAG
CATGAC----
 C G T A C G T A A C G T A C T G C G T A A G T C C G T A C T G A C G T A A C T G
T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:AATGACAAAG
----ACAAAG
 C G T A C G T A A C G T A C T G C G T A A G T C C G T A C T G A C G T A A C T G
A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AATGACAAAG-
-AAAACAAAGG
 C G T A C G T A A C G T A C T G C G T A A G T C C G T A C T G A C G T A A C T G A C G T
A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AATGACAAAG-
-VRRACAAWGG
 C G T A C G T A A C G T A C T G C G T A A G T C C G T A C T G A C G T A A C T G A C G T
A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AATGACAAAG
-TTGACAGG-
 C G T A C G T A A C G T A C T G C G T A A G T C C G T A C T G A C G T A A C T G
A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AATGACAAAG
ARNTGACA---
 A C G T C G T A C G T A A C G T A C T G C G T A A G T C C G T A C T G A C G T A A C T G
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:AATGACAAAG------
----ACAAAGGNBCCT
 C G T A C G T A A C G T A C T G C G T A A G T C C G T A C T G A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T