Information for 10-TTTTAAAAAC (Motif 18)

G A C T G C A T C A G T G C A T G C T A C T G A C T G A T C G A C G T A A T G C
Reverse Opposite:
T A C G A C G T A G C T G A C T A G C T C G A T C G T A G T C A C G T A C T G A
p-value:1e-6
log p-value:-1.496e+01
Information Content per bp:1.680
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif4.22%
Number of Background Sequences with motif489.4
Percentage of Background Sequences with motif1.61%
Average Position of motif in Targets52.4 +/- 31.2bp
Average Position of motif in Background44.7 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TTTTAAAAAC--
CCGTATTATAAACAA
 A C G T A C G T A C G T G A C T G C A T C A G T G C A T G C T A C T G A C T G A T C G A C G T A A T G C A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

Arid3b/MA0601.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TTTTAAAAAC
ATATTAATTAA
 A C G T G A C T G C A T C A G T G C A T G C T A C T G A C T G A T C G A C G T A A T G C
C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

HOXC10/MA0905.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTTTAAAAAC
NTTTTACGAC
 G A C T G C A T C A G T G C A T G C T A C T G A C T G A T C G A C G T A A T G C
C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C

HOXD11/MA0908.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTTTAAAAAC
NTTTTACGAC
 G A C T G C A T C A G T G C A T G C T A C T G A C T G A T C G A C G T A A T G C
C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C

PB0129.1_Glis2_2/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTTTAAAAAC--
AATATTAATAAAGA
 A C G T A C G T G A C T G C A T C A G T G C A T G C T A C T G A C T G A T C G A C G T A A T G C A C G T A C G T
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

NKX6-1/MA0674.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TTTTAAAAAC
--TTAATTAN
 G A C T G C A T C A G T G C A T G C T A C T G A C T G A T C G A C G T A A T G C
A C G T A C G T C G A T A G C T C G T A C G T A C A G T C A G T C T G A A T G C

PB0080.1_Tbp_1/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TTTTAAAAAC--
TCTTTATATATAAATA
 A C G T A C G T A C G T A C G T G A C T G C A T C A G T G C A T G C T A C T G A C T G A T C G A C G T A A T G C A C G T A C G T
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

HOXC11/MA0651.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTTTAAAAAC-
NTTTTACGACC
 G A C T G C A T C A G T G C A T G C T A C T G A C T G A T C G A C G T A A T G C A C G T
C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C

Hoxa11/MA0911.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTTTAAAAAC-
ANTTTTACGACC
 A C G T G A C T G C A T C A G T G C A T G C T A C T G A C T G A T C G A C G T A A T G C A C G T
G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TTTTAAAAAC-
-TTTAATTGCN
 G A C T G C A T C A G T G C A T G C T A C T G A C T G A T C G A C G T A A T G C A C G T
A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C