Information for 7-AGGAATTCCCCCAGAT (Motif 15)

C G T A C T A G A C T G C G T A C G T A A C G T A G C T A G T C A G T C T G A C A G T C A G T C C G T A C T A G C G T A A G C T
Reverse Opposite:
C T G A A C G T A G T C A C G T A C T G A C T G A C T G A C T G C T A G T C G A C G T A A C G T A C G T A G T C A G T C C G A T
p-value:1e-8
log p-value:-1.924e+01
Information Content per bp:1.907
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.4 +/- 28.6bp
Average Position of motif in Background32.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AGGAATTCCCCCAGAT
-GGAAANCCCC-----
 C G T A C T A G A C T G C G T A C G T A A C G T A G C T A G T C A G T C T G A C A G T C A G T C C G T A C T A G C G T A A G C T
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AGGAATTCCCCCAGAT
-GGAAATCCCC-----
 C G T A C T A G A C T G C G T A C G T A A C G T A G C T A G T C A G T C T G A C A G T C A G T C C G T A C T A G C G T A A G C T
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGGAATTCCCCCAGAT
GGGAAATCCCCN----
 C G T A C T A G A C T G C G T A C G T A A C G T A G C T A G T C A G T C T G A C A G T C A G T C C G T A C T A G C G T A A G C T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGGAATTCCCCCAGAT
GGGGATTCCCCC----
 C G T A C T A G A C T G C G T A C G T A A C G T A G C T A G T C A G T C T G A C A G T C A G T C C G T A C T A G C G T A A G C T
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGGAATTCCCCCAGAT
-GGAAATTCCC-----
 C G T A C T A G A C T G C G T A C G T A A C G T A G C T A G T C A G T C T G A C A G T C A G T C C G T A C T A G C G T A A G C T
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGGAATTCCCCCAGAT
-GGAAATTCCC-----
 C G T A C T A G A C T G C G T A C G T A A C G T A G C T A G T C A G T C T G A C A G T C A G T C C G T A C T A G C G T A A G C T
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T A C G T A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGGAATTCCCCCAGAT
NCTGGAATGC--------
 A C G T A C G T C G T A C T A G A C T G C G T A C G T A A C G T A G C T A G T C A G T C T G A C A G T C A G T C C G T A C T A G C G T A A G C T
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGGAATTCCCCCAGAT
CCWGGAATGY--------
 A C G T A C G T C G T A C T A G A C T G C G T A C G T A A C G T A G C T A G T C A G T C T G A C A G T C A G T C C G T A C T A G C G T A A G C T
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGGAATTCCCCCAGAT
AGGGGATTCCCCT----
 A C G T C G T A C T A G A C T G C G T A C G T A A C G T A G C T A G T C A G T C T G A C A G T C A G T C C G T A C T A G C G T A A G C T
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T A C G T A C G T A C G T A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AGGAATTCCCCCAGAT---
--AAATTCCCCCCGGAAGT
 C G T A C T A G A C T G C G T A C G T A A C G T A G C T A G T C A G T C T G A C A G T C A G T C C G T A C T A G C G T A A G C T A C G T A C G T A C G T
A C G T A C G T C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T