Information for 4-GTCACCTTTGMCCCGG (Motif 6)

T C A G A C G T T A G C T G C A A G T C G T A C A C G T A G C T G A C T A T C G G T C A T A G C G T A C G A T C C T A G A C T G
Reverse Opposite:
T G A C G A T C C T A G C A T G A T C G C A G T A T G C C T G A T C G A T G C A C A T G C T A G A C G T A T C G T G C A A G T C
p-value:1e-12
log p-value:-2.923e+01
Information Content per bp:1.592
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif834.2
Percentage of Background Sequences with motif1.75%
Average Position of motif in Targets51.3 +/- 24.8bp
Average Position of motif in Background50.3 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:1
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:GTCACCTTTGMCCCGG
-TGACCTTTGCCCTAN
 T C A G A C G T T A G C T G C A A G T C G T A C A C G T A G C T G A C T A T C G G T C A T A G C G T A C G A T C C T A G A C T G
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.84
Offset:1
Orientation:forward strand
Alignment:GTCACCTTTGMCCCGG
-TGACCTTTGCCCCA-
 T C A G A C G T T A G C T G C A A G T C G T A C A C G T A G C T G A C T A T C G G T C A T A G C G T A C G A T C C T A G A C T G
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:GTCACCTTTGMCCCGG
-TGACCTTTGCCCTA-
 T C A G A C G T T A G C T G C A A G T C G T A C A C G T A G C T G A C T A T C G G T C A T A G C G T A C G A T C C T A G A C T G
A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:4
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:GTCACCTTTGMCCCGG
-TGACCTCTGACCCCN
 T C A G A C G T T A G C T G C A A G T C G T A C A C G T A G C T G A C T A T C G G T C A T A G C G T A C G A T C C T A G A C T G
A C G T G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:5
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:GTCACCTTTGMCCCGG
-TGACCTTTGACCTC-
 T C A G A C G T T A G C T G C A A G T C G T A C A C G T A G C T G A C T A T C G G T C A T A G C G T A C G A T C C T A G A C T G
A C G T G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:6
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:GTCACCTTTGMCCCGG
-TGACCTTTGACCTN-
 T C A G A C G T T A G C T G C A A G T C G T A C A C G T A G C T G A C T A T C G G T C A T A G C G T A C G A T C C T A G A C T G
A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C A C G T

RXRB/MA0855.1/Jaspar

Match Rank:7
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:GTCACCTTTGMCCCGG
-TGACCTTTGACCCC-
 T C A G A C G T T A G C T G C A A G T C G T A C A C G T A G C T G A C T A T C G G T C A T A G C G T A C G A T C C T A G A C T G
A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C A C G T

Rxra/MA0512.2/Jaspar

Match Rank:8
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:GTCACCTTTGMCCCGG
-TGACCTTTGACCCC-
 T C A G A C G T T A G C T G C A A G T C G T A C A C G T A G C T G A C T A T C G G T C A T A G C G T A C G A T C C T A G A C T G
A C G T A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C A C G T

RXRG/MA0856.1/Jaspar

Match Rank:9
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:GTCACCTTTGMCCCGG
-TGACCTTTGACCCC-
 T C A G A C G T T A G C T G C A A G T C G T A C A C G T A G C T G A C T A T C G G T C A T A G C G T A C G A T C C T A G A C T G
A C G T A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C A C G T

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:10
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GTCACCTTTGMCCCGG
GTTGACCTTTGACCTTT
 A C G T T C A G A C G T T A G C T G C A A G T C G T A C A C G T A G C T G A C T A T C G G T C A T A G C G T A C G A T C C T A G A C T G
T A C G G A C T A C G T A C T G C G T A A G T C A G T C A C G T C G A T A C G T A C T G C G T A G T A C A G T C A G C T G A C T C A G T