Information for 2-TGGCAGCTTC (Motif 5)

A C G T A C T G A C T G G T A C C G T A A T C G A G T C A G C T A C G T A G T C
Reverse Opposite:
A C T G C G T A C T G A A C T G T A G C C G A T A C T G A G T C A G T C C G T A
p-value:1e-11
log p-value:-2.546e+01
Information Content per bp:1.880
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif9.78%
Number of Background Sequences with motif136.5
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets67.2 +/- 21.2bp
Average Position of motif in Background50.1 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----TGGCAGCTTC-----
NNTTCTGGAANNTTCTAGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G G T A C C G T A A T C G A G T C A G C T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.68
Offset:5
Orientation:forward strand
Alignment:TGGCAGCTTC-
-----GCTTCC
 A C G T A C T G A C T G G T A C C G T A A T C G A G T C A G C T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TGGCAGCTTC
TTGGCA-----
 A C G T A C G T A C T G A C T G G T A C C G T A A T C G A G T C A G C T A C G T A G T C
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAGCTTC
NTTGGCANN---
 A C G T A C G T A C G T A C T G A C T G G T A C C G T A A T C G A G T C A G C T A C G T A G T C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:5
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TGGCAGCTTC-
ADGGYAGYAGCATCT
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G G T A C C G T A A T C G A G T C A G C T A C G T A G T C A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TGGCAGCTTC
NNTTGGCANN---
 A C G T A C G T A C G T A C G T A C T G A C T G G T A C C G T A A T C G A G T C A G C T A C G T A G T C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAGCTTC
CTTGGCAA----
 A C G T A C G T A C G T A C T G A C T G G T A C C G T A A T C G A G T C A G C T A C G T A G T C
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TGGCAGCTTC--
GATATTGACAGCTGCGT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G G T A C C G T A A T C G A G T C A G C T A C G T A G T C A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

HSF4/MA0771.1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TGGCAGCTTC
TTCTAGAACGTTC
 A C G T A C G T A C G T A C G T A C T G A C T G G T A C C G T A A T C G A G T C A G C T A C G T A G T C
C G A T C A G T T A G C A G C T T C G A A T C G G C T A G C T A A G T C T C A G C G A T C G A T A G T C

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TGGCAGCTTC--
TTCTAGAABNTTCTA
 A C G T A C G T A C G T A C G T A C T G A C T G G T A C C G T A A T C G A G T C A G C T A C G T A G T C A C G T A C G T
G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A