Information for 3-GGAACCTSCKGGAAAT (Motif 3)

T A C G A C T G C G T A C G T A G A T C A G T C A C G T A T C G G T A C A C G T C T A G A C T G C T G A G T C A T G C A C A G T
Reverse Opposite:
G T C A A C G T A C G T A G C T T A G C A G T C T G C A A C T G T A C G G T C A C T A G C T A G G C A T C G A T A G T C A G T C
p-value:1e-14
log p-value:-3.269e+01
Information Content per bp:1.708
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif5.43%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.2 +/- 25.6bp
Average Position of motif in Background46.2 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HSF4/MA0771.1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGAACCTSCKGGAAAT
-GAANNTTCTAGAA--
 T A C G A C T G C G T A C G T A G A T C A G T C A C G T A T C G G T A C A C G T C T A G A C T G C T G A G T C A T G C A C A G T
A C G T T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A A C G T A C G T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGAACCTSCKGGAAAT
TAGAANVTTCTAGAA--
 A C G T T A C G A C T G C G T A C G T A G A T C A G T C A C G T A T C G G T A C A C G T C T A G A C T G C T G A G T C A T G C A C A G T
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A A C G T A C G T

HSF1/MA0486.2/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGAACCTSCKGGAAAT
-GAACGTTCTAGAA--
 T A C G A C T G C G T A C G T A G A T C A G T C A C G T A T C G G T A C A C G T C T A G A C T G C T G A G T C A T G C A C A G T
A C G T C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A A C G T A C G T

HSF2/MA0770.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGAACCTSCKGGAAAT
-GAANGTTCTAGAA--
 T A C G A C T G C G T A C G T A G A T C A G T C A C G T A T C G G T A C A C G T C T A G A C T G C T G A G T C A T G C A C A G T
A C G T T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A A C G T A C G T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------GGAACCTSCKGGAAAT
NNTTCTGGAANNTTCTAGAA--
 A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G C G T A C G T A G A T C A G T C A C G T A T C G G T A C A C G T C T A G A C T G C T G A G T C A T G C A C A G T
A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGAACCTSCKGGAAAT
AGGAAACAGCTG-----
 A C G T T A C G A C T G C G T A C G T A G A T C A G T C A C G T A T C G G T A C A C G T C T A G A C T G C T G A G T C A T G C A C A G T
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G A C G T A C G T A C G T A C G T A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GGAACCTSCKGGAAAT
----CTTCCNGGAA--
 T A C G A C T G C G T A C G T A G A T C A G T C A C G T A T C G G T A C A C G T C T A G A C T G C T G A G T C A T G C A C A G T
A C G T A C G T A C G T A C G T A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GGAACCTSCKGGAAAT
SNGCACCTGCHS-----
 A C G T T A C G A C T G C G T A C G T A G A T C A G T C A C G T A T C G G T A C A C G T C T A G A C T G C T G A G T C A T G C A C A G T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T A C G T

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----GGAACCTSCKGGAAAT
NTNATGCAAYMNNHTGMAAY-
 A C G T A C G T A C G T A C G T A C G T T A C G A C T G C G T A C G T A G A T C A G T C A C G T A T C G G T A C A C G T C T A G A C T G C T G A G T C A T G C A C A G T
T G C A G C A T C G A T C G T A C A G T A C T G G T A C C G T A C T G A A G C T G T C A A C T G C T A G G T C A C G A T A C T G G T A C T G C A C G T A A G C T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GGAACCTSCKGGAAAT
ATTGCCTCAGGCAAT-
 T A C G A C T G C G T A C G T A G A T C A G T C A C G T A T C G G T A C A C G T C T A G A C T G C T G A G T C A T G C A C A G T
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T A C G T