Information for 10-CGCTAGCGGG (Motif 21)

A G T C A C T G A G T C A C G T C G T A A C T G A G T C A C T G A C T G A C T G
Reverse Opposite:
G T A C A G T C G T A C A C T G A G T C A C G T C G T A A C T G A G T C A C T G
p-value:1e-6
log p-value:-1.579e+01
Information Content per bp:1.946
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif19.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets57.5 +/- 21.1bp
Average Position of motif in Background51.9 +/- 40.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0127.1_Gata6_2/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CGCTAGCGGG---
GCGGCGATATCGCAGCG
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C G T C G T A A C T G A G T C A C T G A C T G A C T G A C G T A C G T A C G T
C A T G A T G C A T C G T C A G G T A C C A T G T G C A C A G T G T C A A C G T G T A C C A T G A T G C T G C A A T C G G A T C C A G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CGCTAGCGGG--------
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A G T C A C T G A G T C A C G T C G T A A C T G A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CGCTAGCGGG--
--CWGGCGGGAA
 A G T C A C T G A G T C A C G T C G T A A C T G A G T C A C T G A C T G A C T G A C G T A C G T
A C G T A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A

MYBL1/MA0776.1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CGCTAGCGGG
ACCGTTAACGGT
 A C G T A C G T A G T C A C T G A G T C A C G T C G T A A C T G A G T C A C T G A C T G A C T G
C T G A G T A C T A G C C A T G A G C T G C A T C G T A C T G A A G T C A T C G A C T G G A C T

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CGCTAGCGGG-----
NAGANTGGCGGGGNGNA
 A C G T A C G T A G T C A C T G A G T C A C G T C G T A A C T G A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CGCTAGCGGG----
----GGCGGGAARN
 A G T C A C T G A G T C A C G T C G T A A C T G A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

CTCF/MA0139.1/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CGCTAGCGGG-----
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C G T C G T A A C T G A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

NRF1/MA0506.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CGCTAGCGGG
TGCGCAGGCGC-
 A C G T A C G T A G T C A C T G A G T C A C G T C G T A A C T G A G T C A C T G A C T G A C T G
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CGCTAGCGGG------
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C G T C G T A A C T G A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CGCTAGCGGG
NGCTN-----
 A G T C A C T G A G T C A C G T C G T A A C T G A G T C A C T G A C T G A C T G
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T