Information for 11-TATTAAACGT (Motif 19)

A C G T C G T A C G A T A C G T C G T A G T C A C G T A A G T C A C T G A C G T
Reverse Opposite:
C G T A T G A C A C T G C G A T A C G T A C G T C G T A C G T A C G A T C G T A
p-value:1e-9
log p-value:-2.131e+01
Information Content per bp:1.863
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.53%
Number of Background Sequences with motif69.8
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets58.9 +/- 25.0bp
Average Position of motif in Background48.7 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:TATTAAACGT
-ATTAAA---
 A C G T C G T A C G A T A C G T C G T A G T C A C G T A A G T C A C T G A C G T
A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TATTAAACGT-
-GCTAAACGGT
 A C G T C G T A C G A T A C G T C G T A G T C A C G T A A G T C A C T G A C G T A C G T
A C G T T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

GSX2/MA0893.1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TATTAAACGT
ACTAATTAAA---
 A C G T A C G T A C G T A C G T C G T A C G A T A C G T C G T A G T C A C G T A A G T C A C T G A C G T
G T C A A T G C G A C T G T C A C G T A G C A T G C A T G C T A T C G A G T C A A C G T A C G T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TATTAAACGT
NGCAATTAAA---
 A C G T A C G T A C G T A C G T C G T A C G A T A C G T C G T A G T C A C G T A A G T C A C T G A C G T
T A C G A T C G G A T C G T C A C T G A G C A T C G A T G C T A T C G A G C T A A C G T A C G T A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TATTAAACGT
NTAATTAATAT-
 A C G T A C G T A C G T C G T A C G A T A C G T C G T A G T C A C G T A A G T C A C T G A C G T
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T

NKX6-2/MA0675.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TATTAAACGT
CTAATTAA----
 A C G T A C G T A C G T C G T A C G A T A C G T C G T A G T C A C G T A A G T C A C T G A C G T
A T G C G A C T G T C A G C T A C G A T G C A T C T G A G C T A A C G T A C G T A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TATTAAACGT--
CCGTATTATAAACAA
 A C G T A C G T A C G T A C G T C G T A C G A T A C G T C G T A G T C A C G T A A G T C A C T G A C G T A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

NKX6-1/MA0674.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TATTAAACGT
GTAATTAA----
 A C G T A C G T A C G T C G T A C G A T A C G T C G T A G T C A C G T A A G T C A C T G A C G T
T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A A C G T A C G T A C G T A C G T

PB0001.1_Arid3a_1/Jaspar

Match Rank:9
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------TATTAAACGT-
GGGTTTAATTAAAATTC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T C G T A G T C A C G T A A G T C A C T G A C G T A C G T
T A C G A C T G A C T G G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A G T C A G A C T G C A T G A T C

Foxq1/MA0040.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TATTAAACGT--
-AATAAACAATN
 A C G T C G T A C G A T A C G T C G T A G T C A C G T A A G T C A C T G A C G T A C G T A C G T
A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A