Information for 10-AGCCTTTATT (Motif 15)

T G C A C T A G A G T C G A T C A C G T A C G T A C G T C T G A A C G T A C G T
Reverse Opposite:
G T C A T G C A G A C T G T C A C G T A C G T A C T A G A C T G A G T C A C G T
p-value:1e-9
log p-value:-2.296e+01
Information Content per bp:1.837
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.12%
Number of Background Sequences with motif138.7
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets45.3 +/- 22.4bp
Average Position of motif in Background46.6 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:forward strand
Alignment:AGCCTTTATT
--CCTTTGTT
 T G C A C T A G A G T C G A T C A C G T A C G T A C G T C T G A A C G T A C G T
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.69
Offset:2
Orientation:forward strand
Alignment:AGCCTTTATT--
--CCTTTGTTTT
 T G C A C T A G A G T C G A T C A C G T A C G T A C G T C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

PB0061.1_Sox11_1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AGCCTTTATT-----
NNNTCCTTTGTTCTNNN
 A C G T A C G T T G C A C T A G A G T C G A T C A C G T A C G T A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

CDX1/MA0878.1/Jaspar

Match Rank:4
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:AGCCTTTATT--
---TTTTATTGC
 T G C A C T A G A G T C G A T C A C G T A C G T A C G T C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AGCCTTTATT-----
TNNTCCTTTGTTCTNNT
 A C G T A C G T T G C A C T A G A G T C G A T C A C G T A C G T A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AGCCTTTATT
--CCWTTGTY
 T G C A C T A G A G T C G A T C A C G T A C G T A C G T C T G A A C G T A C G T
A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AGCCTTTATT--
--YCTTTGTTCC
 T G C A C T A G A G T C G A T C A C G T A C G T A C G T C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

BARHL2/MA0635.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AGCCTTTATT
ANCGTTTANN
 T G C A C T A G A G T C G A T C A C G T A C G T A C G T C T G A A C G T A C G T
C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C

CDX2/MA0465.1/Jaspar

Match Rank:9
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:AGCCTTTATT----
---TTTTATGGCTN
 T G C A C T A G A G T C G A T C A C G T A C G T A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

HOXA13/MA0650.1/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AGCCTTTATT--
--TTTTTATTGG
 T G C A C T A G A G T C G A T C A C G T A C G T A C G T C T G A A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G