Information for 5-SCWMWRTMAAKAMTTT (Motif 7)

A T C G A G T C C G A T G T A C C G T A C T A G C G A T G T C A C G T A C G T A C A G T G T C A T G A C A C G T A C G T A C G T
Reverse Opposite:
G T C A G T C A C G T A A C T G A C G T G T C A A C G T C G A T A C G T C G T A A G T C C G A T A C T G C G T A A C T G T A G C
p-value:1e-11
log p-value:-2.651e+01
Information Content per bp:1.802
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.4 +/- 23.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxa2/MA0047.2/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:SCWMWRTMAAKAMTTT
NCTAAGTAAACA----
 A T C G A G T C C G A T G T A C C G T A C T A G C G A T G T C A C G T A C G T A C A G T G T C A T G A C A C G T A C G T A C G T
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:SCWMWRTMAAKAMTTT
--TAAGTAAACAAA--
 A T C G A G T C C G A T G T A C C G T A C T A G C G A T G T C A C G T A C G T A C A G T G T C A T G A C A C G T A C G T A C G T
A C G T A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A A C G T A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:SCWMWRTMAAKAMTTT
NCWRWGTAAACANSV-
 A T C G A G T C C G A T G T A C C G T A C T A G C G A T G T C A C G T A C G T A C A G T G T C A T G A C A C G T A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:SCWMWRTMAAKAMTTT
--TATGTAAATAT---
 A T C G A G T C C G A T G T A C C G T A C T A G C G A T G T C A C G T A C G T A C A G T G T C A T G A C A C G T A C G T A C G T
A C G T A C G T G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:SCWMWRTMAAKAMTTT
--TATGTAAATAT---
 A T C G A G T C C G A T G T A C C G T A C T A G C G A T G T C A C G T A C G T A C A G T G T C A T G A C A C G T A C G T A C G T
A C G T A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:SCWMWRTMAAKAMTTT
--WAAGTAAAYA----
 A T C G A G T C C G A T G T A C C G T A C T A G C G A T G T C A C G T A C G T A C A G T G T C A T G A C A C G T A C G T A C G T
A C G T A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:SCWMWRTMAAKAMTTT
--AAAGTAAACA----
 A T C G A G T C C G A T G T A C C G T A C T A G C G A T G T C A C G T A C G T A C A G T G T C A T G A C A C G T A C G T A C G T
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:SCWMWRTMAAKAMTTT
--AAAGTAAACA----
 A T C G A G T C C G A T G T A C C G T A C T A G C G A T G T C A C G T A C G T A C A G T G T C A T G A C A C G T A C G T A C G T
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:9
Score:0.60
Offset:8
Orientation:forward strand
Alignment:SCWMWRTMAAKAMTTT
--------AATAATT-
 A T C G A G T C C G A T G T A C C G T A C T A G C G A T G T C A C G T A C G T A C A G T G T C A T G A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:SCWMWRTMAAKAMTTT
-CAAAGTAAACANNNN
 A T C G A G T C C G A T G T A C C G T A C T A G C G A T G T C A C G T A C G T A C A G T G T C A T G A C A C G T A C G T A C G T
A C G T G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A