Information for 5-GCCTGCATCG (Motif 23)

T A C G G A T C G A T C C G A T T C A G G T A C T G C A G C A T A G T C A C T G
Reverse Opposite:
T G A C T C A G C G T A A C G T C A T G A G T C C G T A C T A G C T A G A T G C
p-value:1e-6
log p-value:-1.446e+01
Information Content per bp:1.676
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif3.40%
Number of Background Sequences with motif474.7
Percentage of Background Sequences with motif0.96%
Average Position of motif in Targets50.0 +/- 24.5bp
Average Position of motif in Background49.9 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM2/MA0767.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGCATCG
TACCCGCATN-
 A C G T T A C G G A T C G A T C C G A T T C A G G T A C T G C A G C A T A G T C A C T G
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GCCTGCATCG--
TCGTACCCGCATCATT
 A C G T A C G T A C G T A C G T T A C G G A T C G A T C C G A T T C A G G T A C T G C A G C A T A G T C A C T G A C G T A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGCATCG----
TGCCTGCGYCMCCTT
 A C G T T A C G G A T C G A T C C G A T T C A G G T A C T G C A G C A T A G T C A C T G A C G T A C G T A C G T A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

GCM1/MA0646.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCCTGCATCG
GTACCCGCATN-
 A C G T A C G T T A C G G A T C G A T C C G A T T C A G G T A C T G C A G C A T A G T C A C T G
T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCCTGCATCG
TWGTCTGV----
 A C G T A C G T T A C G G A T C G A T C C G A T T C A G G T A C T G C A G C A T A G T C A C T G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.58
Offset:-9
Orientation:forward strand
Alignment:---------GCCTGCATCG
GGGGCCGAGGCCTG-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A T C G A T C C G A T T C A G G T A C T G C A G C A T A G T C A C T G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GCCTGCATCG
VBSYGTCTGG----
 A C G T A C G T A C G T A C G T T A C G G A T C G A T C C G A T T C A G G T A C T G C A G C A T A G T C A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCCTGCATCG
AGGCCTNG----
 A C G T A C G T T A C G G A T C G A T C C G A T T C A G G T A C T G C A G C A T A G T C A C T G
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GCCTGCATCG--
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T A C G T T A C G G A T C G A T C C G A T T C A G G T A C T G C A G C A T A G T C A C T G A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCCTGCATCG
CTGTCTGG----
 A C G T A C G T T A C G G A T C G A T C C G A T T C A G G T A C T G C A G C A T A G T C A C T G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T