Information for 4-CCAAACTCTA (Motif 20)

G A T C G T A C G T C A G T C A G C T A G T A C G A C T T G A C G A C T T C G A
Reverse Opposite:
A G C T C T G A A C T G C T G A C A T G C G A T C A G T C A G T C A T G C A T G
p-value:1e-7
log p-value:-1.718e+01
Information Content per bp:1.536
Number of Target Sequences with motif148.0
Percentage of Target Sequences with motif22.87%
Number of Background Sequences with motif7342.8
Percentage of Background Sequences with motif14.80%
Average Position of motif in Targets48.7 +/- 27.5bp
Average Position of motif in Background50.1 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCAAACTCTA
TGCCAA------
 A C G T A C G T G A T C G T A C G T C A G T C A G C T A G T A C G A C T T G A C G A C T T C G A
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCAAACTCTA
GGCCACACCCAN
 A C G T A C G T G A T C G T A C G T C A G T C A G C T A G T A C G A C T T G A C G A C T T C G A
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCAAACTCTA
CGTGCCAAG-----
 A C G T A C G T A C G T A C G T G A T C G T A C G T C A G T C A G C T A G T A C G A C T T G A C G A C T T C G A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCAAACTCTA----
GGCAAAAGTCCAATAA
 A C G T A C G T G A T C G T A C G T C A G T C A G C T A G T A C G A C T T G A C G A C T T C G A A C G T A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

PB0034.1_Irf4_1/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CCAAACTCTA
CGTATCGAAACCAAA
 A C G T A C G T A C G T A C G T A C G T G A T C G T A C G T C A G T C A G C T A G T A C G A C T T G A C G A C T T C G A
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

PB0141.1_Isgf3g_2/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCAAACTCTA---
GCAAAACATTACTA
 A C G T G A T C G T A C G T C A G T C A G C T A G T A C G A C T T G A C G A C T T C G A A C G T A C G T A C G T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCAAACTCTA----
TGCCAAAATAAACANN
 A C G T A C G T G A T C G T A C G T C A G T C A G C T A G T A C G A C T T G A C G A C T T C G A A C G T A C G T A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

Klf1/MA0493.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCAAACTCTA
GGCCACACCCA-
 A C G T A C G T G A T C G T A C G T C A G T C A G C T A G T A C G A C T T G A C G A C T T C G A
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:9
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------CCAAACTCTA
CANAGNNCAAAGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C G T A C G T C A G T C A G C T A G T A C G A C T T G A C G A C T T C G A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

HNF4G/MA0484.1/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CCAAACTCTA
AGAGTCCAAAGTCCA
 A C G T A C G T A C G T A C G T A C G T G A T C G T A C G T C A G T C A G C T A G T A C G A C T T G A C G A C T T C G A
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A