Information for 1-CTCTNVCAGATGACAG (Motif 2)

A T G C A C G T A T G C C A G T A T C G T C G A G T A C C G T A T A C G C G T A C A G T A C T G T C G A G A T C C G T A C A T G
Reverse Opposite:
G T A C C G A T C A T G A C G T G T A C G T C A A C G T A G T C A C G T C A T G A G C T T A G C G C T A A T C G C G T A T A C G
p-value:1e-14
log p-value:-3.265e+01
Information Content per bp:1.690
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.2 +/- 27.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CTCTNVCAGATGACAG
----AACAGATGGC--
 A T G C A C G T A T G C C A G T A T C G T C G A G T A C C G T A T A C G C G T A C A G T A C T G T C G A G A T C C G T A C A T G
A C G T A C G T A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CTCTNVCAGATGACAG
----AACAGATGGT--
 A T G C A C G T A T G C C A G T A T C G T C G A G T A C C G T A T A C G C G T A C A G T A C T G T C G A G A T C C G T A C A T G
A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTCTNVCAGATGACAG--
-AAGGCCAGATGGTCCGG
 A T G C A C G T A T G C C A G T A T C G T C G A G T A C C G T A T A C G C G T A C A G T A C T G T C G A G A T C C G T A C A T G A C G T A C G T
A C G T G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CTCTNVCAGATGACAG
----AACAKATGGY--
 A T G C A C G T A T G C C A G T A T C G T C G A G T A C C G T A T A C G C G T A C A G T A C T G T C G A G A T C C G T A C A T G
A C G T A C G T A C G T A C G T C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T A C G T

TGIF2/MA0797.1/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CTCTNVCAGATGACAG
---TGACAGCTGTCA-
 A T G C A C G T A T G C C A G T A T C G T C G A G T A C C G T A T A C G C G T A C A G T A C T G T C G A G A T C C G T A C A T G
A C G T A C G T A C G T G C A T C T A G C T G A G A T C C T G A C A T G T A G C G A C T C T A G G A C T A T G C C G T A A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CTCTNVCAGATGACAG
---TGACAGGTGTCA-
 A T G C A C G T A T G C C A G T A T C G T C G A G T A C C G T A T A C G C G T A C A G T A C T G T C G A G A T C C G T A C A T G
A C G T A C G T A C G T G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTCTNVCAGATGACAG
--VNAVCAGCTGGC--
 A T G C A C G T A T G C C A G T A T C G T C G A G T A C C G T A T A C G C G T A C A G T A C T G T C G A G A T C C G T A C A T G
A C G T A C G T T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CTCTNVCAGATGACAG
---TGACAGGTGTCA-
 A T G C A C G T A T G C C A G T A T C G T C G A G T A C C G T A T A C G C G T A C A G T A C T G T C G A G A T C C G T A C A T G
A C G T A C G T A C G T C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:CTCTNVCAGATGACAG
-------ARNTGACA-
 A T G C A C G T A T G C C A G T A T C G T C G A G T A C C G T A T A C G C G T A C A G T A C T G T C G A G A T C C G T A C A T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T

TGIF1/MA0796.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CTCTNVCAGATGACAG
---TGACAGCTGTCA-
 A T G C A C G T A T G C C A G T A T C G T C G A G T A C C G T A T A C G C G T A C A G T A C T G T C G A G A T C C G T A C A T G
A C G T A C G T A C G T G C A T T C A G T C G A A G T C T C G A A C T G T A G C A G C T T A C G G C A T G T A C C G T A A C G T