Information for 11-CTTYATGTATACCTTC (Motif 19)

A G T C C G A T A C G T A G T C C G T A C G A T A C T G C G A T G C T A C A G T C G T A A G T C G T A C A C G T A C G T A T G C
Reverse Opposite:
T A C G G T C A C G T A A C T G C T A G C G A T G C T A C A G T C G T A G T A C C G T A C G A T C T A G C G T A C G T A A C T G
p-value:1e-7
log p-value:-1.800e+01
Information Content per bp:1.711
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif32.1
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets39.5 +/- 19.0bp
Average Position of motif in Background43.3 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTTYATGTATACCTTC
TNNATTATGCATANNTT-
 A C G T A C G T A G T C C G A T A C G T A G T C C G T A C G A T A C T G C G A T G C T A C A G T C G T A A G T C G T A C A C G T A C G T A T G C
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T A C G T

PH0087.1_Irx6/Jaspar

Match Rank:2
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CTTYATGTATACCTTC
AAAATACATGTAAAAAT--
 A C G T A C G T A C G T A G T C C G A T A C G T A G T C C G T A C G A T A C T G C G A T G C T A C A G T C G T A A G T C G T A C A C G T A C G T A T G C
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T A C G T A C G T

PB0080.1_Tbp_1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTTYATGTATACCTTC
TCTTTATATATAAATA-
 A C G T A G T C C G A T A C G T A G T C C G T A C G A T A C T G C G A T G C T A C A G T C G T A A G T C G T A C A C G T A C G T A T G C
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A A C G T

POU4F1/MA0790.1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTTYATGTATACCTTC
CATTAATTATTCAT--
 A G T C C G A T A C G T A G T C C G T A C G A T A C T G C G A T G C T A C A G T C G T A A G T C G T A C A C G T A C G T A T G C
G T A C C T G A A G C T G C A T G C T A G C T A G C A T G C A T C G T A C G A T C A G T G A T C C T G A A G C T A C G T A C G T

NFIL3/MA0025.1/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTTYATGTATACCTTC
--TTATGTAACAT---
 A G T C C G A T A C G T A G T C C G T A C G A T A C T G C G A T G C T A C A G T C G T A A G T C G T A C A C G T A C G T A T G C
A C G T A C G T C G A T A C G T C G T A A G C T C T A G A C G T C G T A C T G A A G T C T C A G G A C T A C G T A C G T A C G T

PB0198.1_Zfp128_2/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTTYATGTATACCTTC
NNTATANATATACN---
 A C G T A G T C C G A T A C G T A G T C C G T A C G A T A C T G C G A T G C T A C A G T C G T A A G T C G T A C A C G T A C G T A T G C
A T C G A C T G G C A T C T G A G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G T A C G T C A A C G T A C G T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CTTYATGTATACCTTC
--TGAATTATGCAT--
 A G T C C G A T A C G T A G T C C G T A C G A T A C T G C G A T G C T A C A G T C G T A A G T C G T A C A C G T A C G T A T G C
A C G T A C G T C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T A C G T A C G T

PH0150.1_Pou4f3/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CTTYATGTATACCTTC
GACNTCATTAATAANN--
 A C G T A C G T A G T C C G A T A C G T A G T C C G T A C G A T A C T G C G A T G C T A C A G T C G T A A G T C G T A C A C G T A C G T A T G C
C T A G C T G A T G A C G A T C C A G T G T A C C G T A C G A T C G A T C G T A C T G A C G A T C G T A G T C A A G T C C G A T A C G T A C G T

Foxk1/MA0852.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTTYATGTATACCTTC-
NNNTTTGTTTACATTTN
 A G T C C G A T A C G T A G T C C G T A C G A T A C T G C G A T G C T A C A G T C G T A A G T C G T A C A C G T A C G T A T G C A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

PB0018.1_Foxk1_1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTTYATGTATACCTTC-
NNNTTTGTTTACATTTN
 A G T C C G A T A C G T A G T C C G T A C G A T A C T G C G A T G C T A C A G T C G T A A G T C G T A C A C G T A C G T A T G C A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T