Information for 4-ACTAGTATGCATG (Motif 14)

C G T A A G T C A C G T C G T A C T A G C G A T G T C A A C G T A C T G A G T C G T C A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C T G A G T C C G T A A C G T C G T A A G T C A C G T C G T A A C T G A C G T
p-value:1e-8
log p-value:-2.056e+01
Information Content per bp:1.935
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.0 +/- 18.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ACTAGTATGCATG----
TNNATTATGCATANNTT
 C G T A A G T C A C G T C G T A C T A G C G A T G T C A A C G T A C T G A G T C G T C A A C G T A C T G A C G T A C G T A C G T A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ACTAGTATGCATG
--GAATATTCAT-
 C G T A A G T C A C G T C G T A C T A G C G A T G T C A A C G T A C T G A G T C G T C A A C G T A C T G
A C G T A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ACTAGTATGCATG
--GHATATKCAT-
 C G T A A G T C A C G T C G T A C T A G C G A T G T C A A C G T A C T G A G T C G T C A A C G T A C T G
A C G T A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ACTAGTATGCATG--
ATGAATATTCATGAG
 C G T A A G T C A C G T C G T A C T A G C G A T G T C A A C G T A C T G A G T C G T C A A C G T A C T G A C G T A C G T
G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ACTAGTATGCATG-
-TTCATTTGCATAT
 C G T A A G T C A C G T C G T A C T A G C G A T G T C A A C G T A C T G A G T C G T C A A C G T A C T G A C G T
A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

PB0170.1_Sox17_2/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ACTAGTATGCATG-----
-NTTNTATGAATGTGNNC
 C G T A A G T C A C G T C G T A C T A G C G A T G T C A A C G T A C T G A G T C G T C A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

POU1F1/MA0784.1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:ACTAGTATGCATG--
-CTAATTTGCATATT
 C G T A A G T C A C G T C G T A C T A G C G A T G T C A A C G T A C T G A G T C G T C A A C G T A C T G A C G T A C G T
A C G T G A T C G C A T T G C A G C T A C A G T G C A T C G A T T C A G G T A C C T G A G A C T G C T A G C A T G C A T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:ACTAGTATGCATG
-BTVATTWGCATA
 C G T A A G T C A C G T C G T A C T A G C G A T G T C A A C G T A C T G A G T C G T C A A C G T A C T G
A C G T A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A

PH0144.1_Pou2f2/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ACTAGTATGCATG---
TNTAATTTGCATANNN
 C G T A A G T C A C G T C G T A C T A G C G A T G T C A A C G T A C T G A G T C G T C A A C G T A C T G A C G T A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:ACTAGTATGCATG
-CTCATTTGCATW
 C G T A A G T C A C G T C G T A C T A G C G A T G T C A A C G T A C T G A G T C G T C A A C G T A C T G
A C G T A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A