Information for 10-GGGGTGCCAGCTA (Motif 18)

A C T G A C T G A C T G A C T G A C G T A C T G A G T C A G T C C G T A A C T G A G T C A C G T C G T A
Reverse Opposite:
A C G T G T C A C T A G A G T C A C G T A C T G C T A G A G T C C G T A A G T C A G T C A G T C A G T C
p-value:1e-7
log p-value:-1.830e+01
Information Content per bp:1.944
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.0 +/- 27.2bp
Average Position of motif in Background62.8 +/- 14.4bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GGGGTGCCAGCTA
---ATGCCAACC-
 A C T G A C T G A C T G A C T G A C G T A C T G A G T C A G T C C G T A A C T G A G T C A C G T C G T A
A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GGGGTGCCAGCTA
GCTGGGGGGTACCCCTT-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A C G T A C T G A G T C A G T C C G T A A C T G A G T C A C G T C G T A
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGGGTGCCAGCTA-
-AGGTGNCAGACAG
 A C T G A C T G A C T G A C T G A C G T A C T G A G T C A G T C C G T A A C T G A G T C A C G T C G T A A C G T
A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Spz1/MA0111.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGGGTGCCAGCTA
AGGGTAACAGC--
 A C T G A C T G A C T G A C T G A C G T A C T G A G T C A G T C C G T A A C T G A G T C A C G T C G T A
C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GGGGTGCCAGCTA
--VBTGWCAGCB-
 A C T G A C T G A C T G A C T G A C G T A C T G A G T C A G T C C G T A A C T G A G T C A C G T C G T A
A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGGGTGCCAGCTA
--CGTGCCAAG--
 A C T G A C T G A C T G A C T G A C G T A C T G A G T C A G T C C G T A A C T G A G T C A C G T C G T A
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GGGGTGCCAGCTA
----TGTCANYT-
 A C T G A C T G A C T G A C T G A C G T A C T G A G T C A G T C C G T A A C T G A G T C A C G T C G T A
A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGGGTGCCAGCTA
-AGGTGHCAGACA
 A C T G A C T G A C T G A C T G A C G T A C T G A G T C A G T C C G T A A C T G A G T C A C G T C G T A
A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

PH0164.1_Six4/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GGGGTGCCAGCTA-
TNNNNGGTGTCATNTNT
 A C G T A C G T A C G T A C T G A C T G A C T G A C T G A C G T A C T G A G T C A G T C C G T A A C T G A G T C A C G T C G T A A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGGGTGCCAGCTA
-AGGTGTCA----
 A C T G A C T G A C T G A C T G A C G T A C T G A G T C A G T C C G T A A C T G A G T C A C G T C G T A
A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T