Information for 7-ACGTTAAGGA (Motif 11)

C G T A A G T C A C T G A C G T C G A T C T G A C G T A C T A G A C T G C T G A
Reverse Opposite:
A G C T A G T C A G T C C G A T A G C T C G T A C G T A G T A C C T A G C G A T
p-value:1e-9
log p-value:-2.120e+01
Information Content per bp:1.855
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif12.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets53.4 +/- 20.6bp
Average Position of motif in Background45.5 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYBL1/MA0776.1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ACGTTAAGGA-
ACCGTTAACGGT
 A C G T C G T A A G T C A C T G A C G T C G A T C T G A C G T A C T A G A C T G C T G A A C G T
C T G A G T A C T A G C C A T G A G C T G C A T C G T A C T G A A G T C A T C G A C T G G A C T

GMEB2/MA0862.1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ACGTTAAGGA
TTACGTAA----
 A C G T A C G T C G T A A G T C A C T G A C G T C G A T C T G A C G T A C T A G A C T G C T G A
A C G T C A G T C T G A G T A C A T C G A G C T T G C A T G C A A C G T A C G T A C G T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACGTTAAGGA
ACGTCA----
 C G T A A G T C A C T G A C G T C G A T C T G A C G T A C T A G A C T G C T G A
C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T A C G T A C G T

Hoxa11/MA0911.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ACGTTAAGGA--
ANTTTTACGACC
 C G T A A G T C A C T G A C G T C G A T C T G A C G T A C T A G A C T G C T G A A C G T A C G T
G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ACGTTAAGGA--
AGGTCAAGGTCA
 C G T A A G T C A C T G A C G T C G A T C T G A C G T A C T A G A C T G C T G A A C G T A C G T
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

PH0151.1_Pou6f1_1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ACGTTAAGGA------
GACGATAATGAGCTTGC
 A C G T C G T A A G T C A C T G A C G T C G A T C T G A C G T A C T A G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

Crem/MA0609.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ACGTTAAGGA
TTACGTCATN--
 A C G T A C G T C G T A A G T C A C T G A C G T C G A T C T G A C G T A C T A G A C T G C T G A
A C G T A C G T C G T A A G T C A C T G A C G T G T A C C G T A A G C T G T C A A C G T A C G T

PH0073.1_Hoxc9/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ACGTTAAGGA-----
NNAATTAATGACCNNN
 A C G T C G T A A G T C A C T G A C G T C G A T C T G A C G T A C T A G A C T G C T G A A C G T A C G T A C G T A C G T A C G T
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

NKX6-1/MA0674.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:ACGTTAAGGA-
---TTAATTAN
 C G T A A G T C A C T G A C G T C G A T C T G A C G T A C T A G A C T G C T G A A C G T
A C G T A C G T A C G T C G A T A G C T C G T A C G T A C A G T C A G T C T G A A T G C

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ACGTTAAGGA
--GKTAATGR
 C G T A A G T C A C T G A C G T C G A T C T G A C G T A C T A G A C T G C T G A
A C G T A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A