Information for 5-AATTDCYAGA (Motif 8)

C G T A G C T A G C A T C G A T C T G A A T G C A G T C C G T A C T A G T C G A
Reverse Opposite:
A C G T A G T C C G A T C T A G A T C G G A C T C G T A C G T A C G A T G A C T
p-value:1e-19
log p-value:-4.435e+01
Information Content per bp:1.722
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif4.08%
Number of Background Sequences with motif11.8
Percentage of Background Sequences with motif0.57%
Average Position of motif in Targets53.6 +/- 27.0bp
Average Position of motif in Background59.0 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:AATTDCYAGA--
--ATGCCAGACN
 C G T A G C T A G C A T C G A T C T G A A T G C A G T C C G T A C T A G T C G A A C G T A C G T
A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

PH0009.1_Bsx/Jaspar

Match Rank:2
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----AATTDCYAGA-
CAGGTAATTACCTCAG
 A C G T A C G T A C G T A C G T A C G T C G T A G C T A G C A T C G A T C T G A A T G C A G T C C G T A C T A G T C G A A C G T
T G A C T G C A C T A G C A T G G A C T T G C A G T C A A C G T A C G T C T G A A T G C G A T C A G C T T A G C C T G A C T A G

BCL6B/MA0731.1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AATTDCYAGA-----
TGAATTCCTAGAAAGCA
 A C G T A C G T C G T A G C T A G C A T C G A T C T G A A T G C A G T C C G T A C T A G T C G A A C G T A C G T A C G T A C G T A C G T
A C G T A C T G C T G A C T G A A C G T A G C T A G T C A G T C A C G T T G C A A C T G G T C A C G T A C G T A C T A G G A T C C T G A

PH0007.1_Barx1/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----AATTDCYAGA-
AAAGTAATTAGTGAAT
 A C G T A C G T A C G T A C G T A C G T C G T A G C T A G C A T C G A T C T G A A T G C A G T C C G T A C T A G T C G A A C G T
G T C A G T C A T C G A T A C G G A C T T G C A G T C A A C G T A C G T C T G A A T C G A G C T C A T G G C T A C G T A G C A T

PH0024.1_Dlx5/Jaspar

Match Rank:5
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------AATTDCYAGA
NANNGNTAATTACCNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C T A G C A T C G A T C T G A A T G C A G T C C G T A C T A G T C G A
A T G C T C G A A C T G T G C A T C A G A T G C G A C T G T C A C G T A G A C T C A G T C T G A A G T C A G T C A T G C T A G C A C G T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AATTDCYAGA----
NNNATTCCTCGAAAGN
 A C G T A C G T C G T A G C T A G C A T C G A T C T G A A T G C A G T C C G T A C T A G T C G A A C G T A C G T A C G T A C G T
A T G C C T G A C G T A C G T A C G A T G C A T G T A C A G T C G C A T T G A C C T A G G C T A C G T A C T G A C T A G G C T A

PH0036.1_Gsx2/Jaspar

Match Rank:7
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AATTDCYAGA-
AGGTTAATTAGCTGAT
 A C G T A C G T A C G T A C G T A C G T C G T A G C T A G C A T C G A T C T G A A T G C A G T C C G T A C T A G T C G A A C G T
T C G A T A C G C T A G A G C T G A C T G T C A C G T A C G A T A C G T C T G A T C A G G A T C A G C T A T C G C T G A C A G T

PH0081.1_Pdx1/Jaspar

Match Rank:8
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AATTDCYAGA-
AAGGTAATTAGCTCAT
 A C G T A C G T A C G T A C G T A C G T C G T A G C T A G C A T C G A T C T G A A T G C A G T C C G T A C T A G T C G A A C G T
T G C A T G C A C T A G A T C G G A C T T G C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T T A G C C G T A C A G T

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AATTDCYAGA-------
CAAATCCAGACATCACA
 C G T A G C T A G C A T C G A T C T G A A T G C A G T C C G T A C T A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:10
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----AATTDCYAGA-
TAGAANVTTCTAGAA
 A C G T A C G T A C G T A C G T C G T A G C T A G C A T C G A T C T G A A T G C A G T C C G T A C T A G T C G A A C G T
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A