Information for 7-GSCTGGCTCKCTGCCH (Motif 8)

T C A G A T G C A G T C A G C T A C T G T C A G G T A C A G C T G A T C A C G T A T G C C G A T A T C G A G T C A G T C G C A T
Reverse Opposite:
C G T A A C T G C T A G T A G C C G T A A T C G T G C A C T A G T C G A A C T G A G T C T A G C C T G A A C T G T A C G A G T C
p-value:1e-12
log p-value:-2.992e+01
Information Content per bp:1.713
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif40.5
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets52.8 +/- 26.8bp
Average Position of motif in Background45.1 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.77
Offset:2
Orientation:forward strand
Alignment:GSCTGGCTCKCTGCCH
--CTGGCAGNCTGCCA
 T C A G A T G C A G T C A G C T A C T G T C A G G T A C A G C T G A T C A C G T A T G C C G A T A T C G A G T C A G T C G C A T
A C G T A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GSCTGGCTCKCTGCCH-
-CTTGGCANNNTGCCAA
 T C A G A T G C A G T C A G C T A C T G T C A G G T A C A G C T G A T C A C G T A T G C C G A T A T C G A G T C A G T C G C A T A C G T
A C G T A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GSCTGGCTCKCTGCCH
--TTGGCATGGTGCCA
 T C A G A T G C A G T C A G C T A C T G T C A G G T A C A G C T G A T C A C G T A T G C C G A T A T C G A G T C A G T C G C A T
A C G T A C G T G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GSCTGGCTCKCTGCCH--
GAGCCTGGTACTGWGCCTGR
 A C G T A C G T T C A G A T G C A G T C A G C T A C T G T C A G G T A C A G C T G A T C A C G T A T G C C G A T A T C G A G T C A G T C G C A T A C G T A C G T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GSCTGGCTCKCTGCCH
CAKCTGKYCYYTTYCCC
 A C G T T C A G A T G C A G T C A G C T A C T G T C A G G T A C A G C T G A T C A C G T A T G C C G A T A T C G A G T C A G T C G C A T
T G A C G C T A A C G T T G A C C G A T A C T G A C T G A G T C A G T C A G T C A G C T A G C T A G C T A G C T G A T C T G A C G T A C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GSCTGGCTCKCTGCCH
GGTCTGGCAT-------
 A C G T T C A G A T G C A G T C A G C T A C T G T C A G G T A C A G C T G A T C A C G T A T G C C G A T A T C G A G T C A G T C G C A T
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GSCTGGCTCKCTGCCH
GTCACGCTCNCTGA--
 T C A G A T G C A G T C A G C T A C T G T C A G G T A C A G C T G A T C A C G T A T G C C G A T A T C G A G T C A G T C G C A T
A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.53
Offset:10
Orientation:forward strand
Alignment:GSCTGGCTCKCTGCCH---
----------CTGCCCGCA
 T C A G A T G C A G T C A G C T A C T G T C A G G T A C A G C T G A T C A C G T A T G C C G A T A T C G A G T C A G T C G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GSCTGGCTCKCTGCCH---
-CCTTCCTTCCTTCCTTCC
 T C A G A T G C A G T C A G C T A C T G T C A G G T A C A G C T G A T C A C G T A T G C C G A T A T C G A G T C A G T C G C A T A C G T A C G T A C G T
A C G T A G T C G A T C G A C T C A G T A T G C A G T C A C G T A C G T A T G C G T A C A G C T A G C T G A T C A G T C A G C T A G C T A G T C A G T C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GSCTGGCTCKCTGCCH
CTGTCTGG----------
 A C G T A C G T T C A G A T G C A G T C A G C T A C T G T C A G G T A C A G C T G A T C A C G T A T G C C G A T A T C G A G T C A G T C G C A T
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T