Information for 12-CGCCTTCATCTCG (Motif 16)

G T A C A C T G A T G C A G T C A C G T A C G T A G T C C G T A A C G T A G T C C G A T A T G C A C T G
Reverse Opposite:
A G T C A T C G C G T A A C T G C G T A A C G T A C T G G T C A C G T A A C T G A T C G G T A C A C T G
p-value:1e-9
log p-value:-2.121e+01
Information Content per bp:1.907
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.2 +/- 25.2bp
Average Position of motif in Background53.9 +/- 19.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGCCTTCATCTCG
-GCCGCCATCTTG
 G T A C A C T G A T G C A G T C A C G T A C G T A G T C C G T A A C G T A G T C C G A T A T G C A C T G
A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CGCCTTCATCTCG
--GCTTCC-----
 G T A C A C T G A T G C A G T C A C G T A C G T A G T C C G T A A C G T A G T C C G A T A T G C A C T G
A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T

Atf3/MA0605.1/Jaspar

Match Rank:3
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CGCCTTCATCTCG
--ACGTCATC---
 G T A C A C T G A T G C A G T C A C G T A C G T A G T C C G T A A C G T A G T C C G A T A T G C A C T G
A C G T A C G T C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C A C G T A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:4
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CGCCTTCATCTCG
---YSTTATCT--
 G T A C A C T G A T G C A G T C A C G T A C G T A G T C C G T A A C G T A G T C C G A T A T G C A C T G
A C G T A C G T A C G T A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CGCCTTCATCTCG
AACCCTTTGATCTTT
 A C G T A C G T G T A C A C T G A T G C A G T C A C G T A C G T A G T C C G T A A C G T A G T C C G A T A T G C A C T G
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CGCCTTCATCTCG
TGACCTTGACCT--
 A C G T G T A C A C T G A T G C A G T C A C G T A C G T A G T C C G T A A C G T A G T C C G A T A T G C A C T G
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CGCCTTCATCTCG
-GCNGCCATCTTG
 G T A C A C T G A T G C A G T C A C G T A C G T A G T C C G T A A C G T A G T C C G A T A T G C A C T G
A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

SPIB/MA0081.1/Jaspar

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CGCCTTCATCTCG
----TTCCTCT--
 G T A C A C T G A T G C A G T C A C G T A C G T A G T C C G T A A C G T A G T C C G A T A T G C A C T G
A C G T A C G T A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CGCCTTCATCTCG
-CACTTCCTCT--
 G T A C A C T G A T G C A G T C A C G T A C G T A G T C C G T A A C G T A G T C C G A T A T G C A C T G
A C G T A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CGCCTTCATCTCG
---TCTTATCT--
 G T A C A C T G A T G C A G T C A C G T A C G T A G T C C G T A A C G T A G T C C G A T A T G C A C T G
A C G T A C G T A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T