Information for 9-GCTGAGGGSAGCC (Motif 11)

A C T G A G T C G C A T A C T G G T C A A C T G A C T G A C T G A T G C G C T A A C T G A G T C A G T C
Reverse Opposite:
T C A G A C T G A G T C C G A T A T C G G T A C T G A C G T A C C A G T A G T C C G T A A C T G G T A C
p-value:1e-11
log p-value:-2.736e+01
Information Content per bp:1.751
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif71.4
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets49.9 +/- 28.4bp
Average Position of motif in Background51.5 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.57
Offset:8
Orientation:forward strand
Alignment:GCTGAGGGSAGCC
--------CAGCC
 A C T G A G T C G C A T A C T G G T C A A C T G A C T G A C T G A T G C G C T A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCTGAGGGSAGCC
--TNNGGGCAG--
 A C T G A G T C G C A T A C T G G T C A A C T G A C T G A C T G A T G C G C T A A C T G A G T C A G T C
A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCTGAGGGSAGCC
GCTGTG-------
 A C T G A G T C G C A T A C T G G T C A A C T G A C T G A C T G A T G C G C T A A C T G A G T C A G T C
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GCTGAGGGSAGCC
------CGGAGC-
 A C T G A G T C G C A T A C T G G T C A A C T G A C T G A C T G A T G C G C T A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GCTGAGGGSAGCC
NCNCAGCGGGGGGTC
 A C G T A C G T A C T G A G T C G C A T A C T G G T C A A C T G A C T G A C T G A T G C G C T A A C T G A G T C A G T C
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

ZIC3/MA0697.1/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GCTGAGGGSAGCC
NCGCAGCGGGGGGTC
 A C G T A C G T A C T G A G T C G C A T A C T G G T C A A C T G A C T G A C T G A T G C G C T A A C T G A G T C A G T C
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GCTGAGGGSAGCC
-CAAAGGTCAG--
 A C T G A G T C G C A T A C T G G T C A A C T G A C T G A C T G A T G C G C T A A C T G A G T C A G T C
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GCTGAGGGSAGCC
GCTGTGGTTT---
 A C T G A G T C G C A T A C T G G T C A A C T G A C T G A C T G A T G C G C T A A C T G A G T C A G T C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GCTGAGGGSAGCC
DCHCAGCAGGRGGCC
 A C G T A C G T A C T G A G T C G C A T A C T G G T C A A C T G A C T G A C T G A T G C G C T A A C T G A G T C A G T C
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GCTGAGGGSAGCC
-MKGGGYGTGGCC
 A C T G A G T C G C A T A C T G G T C A A C T G A C T G A C T G A T G C G C T A A C T G A G T C A G T C
A C G T G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C