Information for 2-GGCAGAAARRAGTNDR (Motif 6)

A C T G C T A G A T G C C G T A A C T G G T C A C T G A T C G A C T A G C T G A C G T A T C A G A C G T A G T C C G T A C T G A
Reverse Opposite:
A G C T G C A T T A C G T G C A A G T C G C A T A G C T G A T C A G C T A G C T A C G T A G T C G C A T T A C G A G T C G T A C
p-value:1e-13
log p-value:-3.036e+01
Information Content per bp:1.658
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.0 +/- 27.8bp
Average Position of motif in Background77.1 +/- 4.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGCAGAAARRAGTNDR
-GGAGAAAGGTGCGA-
 A C T G C T A G A T G C C G T A A C T G G T C A C T G A T C G A C T A G C T G A C G T A T C A G A C G T A G T C C G T A C T G A
A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGCAGAAARRAGTNDR
AAACAGACAAAGGAAT---
 A C G T A C G T A C G T A C T G C T A G A T G C C G T A A C T G G T C A C T G A T C G A C T A G C T G A C G T A T C A G A C G T A G T C C G T A C T G A
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T A C G T

Gata4/MA0482.1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGCAGAAARRAGTNDR
NNGAGATAAGA-----
 A C T G C T A G A T G C C G T A A C T G G T C A C T G A T C G A C T A G C T G A C G T A T C A G A C G T A G T C C G T A C T G A
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GGCAGAAARRAGTNDR
---AGATAAGA-----
 A C T G C T A G A T G C C G T A A C T G G T C A C T G A T C G A C T A G C T G A C G T A T C A G A C G T A G T C C G T A C T G A
A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T A C G T A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GGCAGAAARRAGTNDR
-ANAGATAAGAA----
 A C T G C T A G A T G C C G T A A C T G G T C A C T G A T C G A C T A G C T G A C G T A T C A G A C G T A G T C C G T A C T G A
A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T A C G T A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGCAGAAARRAGTNDR
TACTGGAAAAAAAA---
 A C G T A C T G C T A G A T G C C G T A A C T G G T C A C T G A T C G A C T A G C T G A C G T A T C A G A C G T A G T C C G T A C T G A
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GGCAGAAARRAGTNDR
CAATTGCAAAAATAT-----
 A C G T A C G T A C G T A C G T A C T G C T A G A T G C C G T A A C T G G T C A C T G A T C G A C T A G C T G A C G T A T C A G A C G T A G T C C G T A C T G A
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T A C G T A C G T A C G T

GATA2/MA0036.2/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GGCAGAAARRAGTNDR
-NCAGATAAGAANNN-
 A C T G C T A G A T G C C G T A A C T G G T C A C T G A T C G A C T A G C T G A C G T A T C A G A C G T A G T C C G T A C T G A
A C G T C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T A C G T

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGCAGAAARRAGTNDR--
GGAAGGAAGGAAGGAAGG
 A C T G C T A G A T G C C G T A A C T G G T C A C T G A T C G A C T A G C T G A C G T A T C A G A C G T A G T C C G T A C T G A A C G T A C G T
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGCAGAAARRAGTNDR
AAAACAAAGG------
 A C T G C T A G A T G C C G T A A C T G G T C A C T G A T C G A C T A G C T G A C G T A T C A G A C G T A G T C C G T A C T G A
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T