Information for 2-TGAKATGMKGGTR (Motif 5)

A C G T A C T G C T G A A C G T C G T A A C G T A C T G G T C A A C T G A C T G A C T G A C G T C T A G
Reverse Opposite:
A G T C C G T A A G T C A G T C G T A C A C G T A G T C C G T A C G A T T G C A A G C T A G T C C G T A
p-value:1e-13
log p-value:-3.036e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.7 +/- 23.4bp
Average Position of motif in Background29.1 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM2/MA0767.1/Jaspar

Match Rank:1
Score:0.74
Offset:3
Orientation:forward strand
Alignment:TGAKATGMKGGTR
---TATGCGGGTA
 A C G T A C T G C T G A A C G T C G T A A C G T A C T G G T C A A C T G A C T G A C T G A C G T C T A G
A C G T A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

GCM1/MA0646.1/Jaspar

Match Rank:2
Score:0.73
Offset:3
Orientation:forward strand
Alignment:TGAKATGMKGGTR-
---CATGCGGGTAC
 A C G T A C T G C T G A A C G T C G T A A C G T A C T G G T C A A C T G A C T G A C T G A C G T C T A G A C G T
A C G T A C G T A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

PB0024.1_Gcm1_1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TGAKATGMKGGTR---
NNNNATGCGGGTNNNN
 A C G T A C T G C T G A A C G T C G T A A C G T A C T G G T C A A C T G A C T G A C T G A C G T C T A G A C G T A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

PB0022.1_Gata5_1/Jaspar

Match Rank:4
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----TGAKATGMKGGTR
TAAACTGATAAGAAGAT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A A C G T C G T A A C G T A C T G G T C A A C T G A C T G A C T G A C G T C T A G
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T A C G T

SPDEF/MA0686.1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGAKATGMKGGTR
-TACATCCGGGT-
 A C G T A C T G C T G A A C G T C G T A A C G T A C T G G T C A A C T G A C T G A C T G A C G T C T A G
A C G T G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T A C G T

PB0105.1_Arid3a_2/Jaspar

Match Rank:6
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----TGAKATGMKGGTR
NNATNTGATANNNNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A A C G T C G T A A C G T A C T G G T C A A C T G A C T G A C T G A C G T C T A G
G T C A C T G A G C T A A G C T G C A T G A C T A T C G T C G A A G C T T C G A A G T C A T C G A C T G C A T G C A G T A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TGAKATGMKGGTR
ATGGGGTGAT----
 A C G T A C G T A C T G C T G A A C G T C G T A A C G T A C T G G T C A A C T G A C T G A C T G A C G T C T A G
T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:TGAKATGMKGGTR-
-----TNNGGGCAG
 A C G T A C T G C T G A A C G T C G T A A C G T A C T G G T C A A C T G A C T G A C T G A C G T C T A G A C G T
A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

SREBF1/MA0595.1/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TGAKATGMKGGTR
GTGGGGTGAT----
 A C G T A C G T A C T G C T G A A C G T C G T A A C G T A C T G G T C A A C T G A C T G A C T G A C G T C T A G
T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.50
Offset:2
Orientation:forward strand
Alignment:TGAKATGMKGGTR
--ACATCCTGNT-
 A C G T A C T G C T G A A C G T C G T A A C G T A C T G G T C A A C T G A C T G A C T G A C G T C T A G
A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T