Information for 2-GGAMGGWCCG (Motif 2)

C T A G C T A G C T G A T G A C A T C G C T A G G C T A G T A C A T G C T C A G
Reverse Opposite:
A G T C A T C G C A T G C G A T G A T C T A G C A C T G A G C T A G T C A G T C
p-value:1e-14
log p-value:-3.269e+01
Information Content per bp:1.710
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif6.81%
Number of Background Sequences with motif969.4
Percentage of Background Sequences with motif2.10%
Average Position of motif in Targets55.3 +/- 26.6bp
Average Position of motif in Background48.6 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GGAMGGWCCG
TGGGGAAGGGCM-
 A C G T A C G T A C G T C T A G C T A G C T G A T G A C A T C G C T A G G C T A G T A C A T G C T C A G
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGAMGGWCCG-
GGAGAAAGGTGCGA
 A C G T A C G T A C G T C T A G C T A G C T G A T G A C A T C G C T A G G C T A G T A C A T G C T C A G A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGAMGGWCCG
GGAAANCCCC
 C T A G C T A G C T G A T G A C A T C G C T A G G C T A G T A C A T G C T C A G
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

MF0001.1_ETS_class/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGAMGGWCCG
ACCGGAAG-----
 A C G T A C G T A C G T C T A G C T A G C T G A T G A C A T C G C T A G G C T A G T A C A T G C T C A G
C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T A C G T A C G T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGAMGGWCCG
GGGCGGGACC-
 A C G T C T A G C T A G C T G A T G A C A T C G C T A G G C T A G T A C A T G C T C A G
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T

RELA/MA0107.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGAMGGWCCG
GGAAATTCCC
 C T A G C T A G C T G A T G A C A T C G C T A G G C T A G T A C A T G C T C A G
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

ELF5/MA0136.2/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GGAMGGWCCG
ACCCGGAAGTA---
 A C G T A C G T A C G T A C G T C T A G C T A G C T G A T G A C A T C G C T A G G C T A G T A C A T G C T C A G
C G T A T G A C T A G C T G A C C A T G C A T G G T C A G C T A T C A G G A C T C T G A A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGAMGGWCCG
NGAAGC----
 C T A G C T A G C T G A T G A C A T C G C T A G G C T A G T A C A T G C T C A G
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GGAMGGWCCG
NDCAGGAARTNN--
 A C G T A C G T A C G T A C G T C T A G C T A G C T G A T G A C A T C G C T A G G C T A G T A C A T G C T C A G
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T A C G T

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GGAMGGWCCG
AACCGGAAGT----
 A C G T A C G T A C G T A C G T C T A G C T A G C T G A T G A C A T C G C T A G G C T A G T A C A T G C T C A G
T C G A C T G A T A G C T G A C T C A G T C A G C G T A C G T A T C A G A G C T A C G T A C G T A C G T A C G T