Information for 10-AGKSAAGTGSKGG (Motif 17)

C G T A A C T G A C G T A T G C C G T A C G T A A C T G C A G T A C T G A T C G A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C G T C A A T G C A G T C G C T A A G T C A C G T C G A T A T C G G T C A A G T C A C G T
p-value:1e-8
log p-value:-1.969e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif6.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets26.5 +/- 27.6bp
Average Position of motif in Background65.8 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-3/MA0672.1/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:AGKSAAGTGSKGG
-NTCAAGTGGN--
 C G T A A C T G A C G T A T G C C G T A C G T A A C T G C A G T A C T G A T C G A C G T A C T G A C T G
A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AGKSAAGTGSKGG
AAGGCAAGTGT---
 A C G T C G T A A C T G A C G T A T G C C G T A C G T A A C T G C A G T A C T G A T C G A C G T A C T G A C T G
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AGKSAAGTGSKGG
-NTCAAGTGG---
 C G T A A C T G A C G T A T G C C G T A C G T A A C T G C A G T A C T G A T C G A C G T A C T G A C T G
A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AGKSAAGTGSKGG
--TTAAGTGGT--
 C G T A A C T G A C G T A T G C C G T A C G T A A C T G C A G T A C T G A T C G A C G T A C T G A C T G
A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AGKSAAGTGSKGG
--TTRAGTGSYK-
 C G T A A C T G A C G T A T G C C G T A C G T A A C T G C A G T A C T G A T C G A C G T A C T G A C T G
A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGKSAAGTGSKGG
-BTBRAGTGSN--
 C G T A A C T G A C G T A T G C C G T A C G T A A C T G C A G T A C T G A T C G A C G T A C T G A C T G
A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AGKSAAGTGSKGG
--TTAAGTGGN--
 C G T A A C T G A C G T A T G C C G T A C G T A A C T G C A G T A C T G A T C G A C G T A C T G A C T G
A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGKSAAGTGSKGG
-CTYRAGTGSY--
 C G T A A C T G A C G T A T G C C G T A C G T A A C T G C A G T A C T G A T C G A C G T A C T G A C T G
A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGKSAAGTGSKGG-
AANTTCAAGTGGCTTN
 A C G T A C G T C G T A A C T G A C G T A T G C C G T A C G T A A C T G C A G T A C T G A T C G A C G T A C T G A C T G A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

PH0113.1_Nkx2-4/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGKSAAGTGSKGG-
AATTTCAAGTGGCTTN
 A C G T A C G T C G T A A C T G A C G T A T G C C G T A C G T A A C T G C A G T A C T G A T C G A C G T A C T G A C T G A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A