Information for 15-CCTGCGAGCTAGT (Motif 18)

A G T C A G T C A C G T A C T G A G T C A C T G C G T A A C T G A G T C G A C T C G T A C T A G A C G T
Reverse Opposite:
C G T A A G T C A C G T C T G A A C T G A G T C A C G T A G T C C T A G A G T C C G T A A C T G A C T G
p-value:1e-8
log p-value:-1.864e+01
Information Content per bp:1.941
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.2 +/- 29.4bp
Average Position of motif in Background85.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CCTGCGAGCTAGT
GCTGTG-------
 A G T C A G T C A C G T A C T G A G T C A C T G C G T A A C T G A G T C G A C T C G T A C T A G A C G T
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CCTGCGAGCTAGT
-TTGCGTGCVA--
 A G T C A G T C A C G T A C T G A G T C A C T G C G T A A C T G A G T C G A C T C G T A C T A G A C G T
A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.50
Offset:5
Orientation:forward strand
Alignment:CCTGCGAGCTAGT
-----CAGCC---
 A G T C A G T C A C G T A C T G A G T C A C T G C G T A A C T G A G T C G A C T C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----CCTGCGAGCTAGT
RYHYACCTGB--------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C T G C G T A A C T G A G T C G A C T C G T A C T A G A C G T
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:5
Score:0.48
Offset:3
Orientation:forward strand
Alignment:CCTGCGAGCTAGT-------
---GAAAACTAGTTAACATC
 A G T C A G T C A C G T A C T G A G T C A C T G C G T A A C T G A G T C G A C T C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.48
Offset:-4
Orientation:forward strand
Alignment:----CCTGCGAGCTAGT
NNCACCTGNN-------
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C T G C G T A A C T G A G T C G A C T C G T A C T A G A C G T
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:7
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--CCTGCGAGCTAGT-
GTATTGACAGCTNNTT
 A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C T G C G T A A C T G A G T C G A C T C G T A C T A G A C G T A C G T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

SNAI2/MA0745.1/Jaspar

Match Rank:8
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCGAGCTAGT
NCACCTGTN-------
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C T G C G T A A C T G A G T C G A C T C G T A C T A G A C G T
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.47
Offset:3
Orientation:reverse strand
Alignment:CCTGCGAGCTAGT
---CGGAGC----
 A G T C A G T C A C G T A C T G A G T C A C T G C G T A A C T G A G T C G A C T C G T A C T A G A C G T
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.47
Offset:-5
Orientation:forward strand
Alignment:-----CCTGCGAGCTAGT
SNGCACCTGCHS------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C T G C G T A A C T G A G T C G A C T C G T A C T A G A C G T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T