Information for 4-CGTCCAGCGCAGC (Motif 7)

A G T C A C T G A C G T A G T C A G T C C G T A A C T G A G T C A C T G A G T C C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C T G A G T C A C T G A G T C A C G T A C T G A C T G G T C A T A G C A C T G
p-value:1e-9
log p-value:-2.292e+01
Information Content per bp:1.928
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.2 +/- 20.9bp
Average Position of motif in Background55.1 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL001.1_MTE/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGTCCAGCGCAGC------
TTTCGAGCGGAACGGTCGC
 A G T C A C T G A C G T A G T C A G T C C G T A A C T G A G T C A C T G A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T A G C T A G T C C T A G C G T A C T A G A G T C A T C G T A C G C G T A C T A G A G T C A C T G A T C G C G A T G A T C T A C G A G C T

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CGTCCAGCGCAGC------
----CCACACAGCAGGAGA
 A G T C A C T G A C G T A G T C A G T C C G T A A C T G A G T C A C T G A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CGTCCAGCGCAGC------
----GAGCACAGCAGGACA
 A G T C A C T G A C G T A G T C A G T C C G T A A C T G A G T C A C T G A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CGTCCAGCGCAGC------
----CCACACAGCAGGAGA
 A G T C A C T G A C G T A G T C A G T C C G T A A C T G A G T C A C T G A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

NHLH1/MA0048.2/Jaspar

Match Rank:5
Score:0.55
Offset:7
Orientation:forward strand
Alignment:CGTCCAGCGCAGC----
-------CGCAGCTGCG
 A G T C A C T G A C G T A G T C A G T C C G T A A C T G A G T C A C T G A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CGTCCAGCGCAGC
----CAGCC----
 A G T C A C T G A C G T A G T C A G T C C G T A A C T G A G T C A C T G A G T C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:CGTCCAGCGCAGC
-------CACAGN
 A G T C A C T G A C G T A G T C A G T C C G T A A C T G A G T C A C T G A G T C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:CGTCCAGCGCAGC
-------CGGAGC
 A G T C A C T G A C G T A G T C A G T C C G T A A C T G A G T C A C T G A G T C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

E2F4/MA0470.1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CGTCCAGCGCAGC
NNTTCCCGCCC---
 A C G T A G T C A C T G A C G T A G T C A G T C C G T A A C T G A G T C A C T G A G T C C G T A A C T G A G T C
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CGTCCAGCGCAGC---
-TCCCAGMCRAGCCCC
 A G T C A C T G A C G T A G T C A G T C C G T A A C T G A G T C A C T G A G T C C G T A A C T G A G T C A C G T A C G T A C G T
A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C