Information for 3-GGCTAGTCGT (Motif 5)

A C T G A C T G A T G C A C G T C G T A A T C G G A C T A G T C A C T G A C G T
Reverse Opposite:
C G T A A G T C A C T G C G T A A T G C G C A T C G T A A T C G A G T C T A G C
p-value:1e-11
log p-value:-2.627e+01
Information Content per bp:1.856
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.3 +/- 20.2bp
Average Position of motif in Background41.3 +/- 15.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGCTAGTCGT
TGTCTAGACG-
 A C G T A C T G A C T G A T G C A C G T C G T A A T C G G A C T A G T C A C T G A C G T
C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGCTAGTCGT----
GNNATTTGTCGTAANN
 A C G T A C G T A C T G A C T G A T G C A C G T C G T A A T C G G A C T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

PB0136.1_IRC900814_2/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGCTAGTCGT----
ATGGAAAGTCGTAAAA
 A C G T A C G T A C T G A C T G A T G C A C G T C G T A A T C G G A C T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGCTAGTCGT
NGCTN-----
 A C T G A C T G A T G C A C G T C G T A A T C G G A C T A G T C A C T G A C G T
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

ZBTB7A/MA0750.1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGCTAGTCGT-
TCGGTGGTCGCN
 A C G T A C T G A C T G A T G C A C G T C G T A A T C G G A C T A G T C A C T G A C G T A C G T
A C G T G T A C C A T G A C T G C A G T T A C G C T A G C A G T A G T C A T C G A G T C T G A C

VENTX/MA0724.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GGCTAGTCGT-
--CTAATCGNT
 A C T G A C T G A T G C A C G T C G T A A T C G G A C T A G T C A C T G A C G T A C G T
A C G T A C G T G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GGCTAGTCGT---
NNANTGGTGGTCTTNNN
 A C G T A C G T A C G T A C G T A C T G A C T G A T G C A C G T C G T A A T C G G A C T A G T C A C T G A C G T A C G T A C G T A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

HOXD12/MA0873.1/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GGCTAGTCGT-----
----AGTCGTAAAAA
 A C T G A C T G A T G C A C G T C G T A A T C G G A C T A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A

ZBTB7B/MA0694.1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GGCTAGTCGT
TTCGGTGGTCGC
 A C G T A C G T A C T G A C T G A T G C A C G T C G T A A T C G G A C T A G T C A C T G A C G T
C A G T C G A T A G T C C T A G C A T G C A G T A T C G A C T G C A G T G A T C A T C G G A T C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGCTAGTCGT
AAGGCAAGTGT-
 A C G T A C G T A C T G A C T G A T G C A C G T C G T A A T C G G A C T A G T C A C T G A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T