Information for 2-CGGAGGGAAA (Motif 3)

T G A C C T A G T C A G T G C A C A T G T C A G T C A G T C G A T C G A T C G A
Reverse Opposite:
A G C T A G C T A G C T A G T C A G T C G T A C A C G T A G T C G A T C A C T G
p-value:1e-13
log p-value:-3.080e+01
Information Content per bp:1.637
Number of Target Sequences with motif168.0
Percentage of Target Sequences with motif19.40%
Number of Background Sequences with motif3471.8
Percentage of Background Sequences with motif10.74%
Average Position of motif in Targets48.1 +/- 25.2bp
Average Position of motif in Background50.4 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F6/MA0471.1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CGGAGGGAAA-
GGGCGGGAAGG
 T G A C C T A G T C A G T G C A C A T G T C A G T C A G T C G A T C G A T C G A A C G T
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CGGAGGGAAA-
-GGCGGGAARN
 T G A C C T A G T C A G T G C A C A T G T C A G T C A G T C G A T C G A T C G A A C G T
A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CGGAGGGAAA--
TGGCGGGAAAHB
 T G A C C T A G T C A G T G C A C A T G T C A G T C A G T C G A T C G A T C G A A C G T A C G T
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

E2F4/MA0470.1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CGGAGGGAAA-
GGGCGGGAAGG
 T G A C C T A G T C A G T G C A C A T G T C A G T C A G T C G A T C G A T C G A A C G T
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CGGAGGGAAA-
-GGAGGGGGAA
 T G A C C T A G T C A G T G C A C A T G T C A G T C A G T C G A T C G A T C G A A C G T
A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CGGAGGGAAA
BTKGGCGGGAAA
 A C G T A C G T T G A C C T A G T C A G T G C A C A T G T C A G T C A G T C G A T C G A T C G A
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CGGAGGGAAA
CWGGCGGGAA-
 A C G T T G A C C T A G T C A G T G C A C A T G T C A G T C A G T C G A T C G A T C G A
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CGGAGGGAAA-
-GGCGGGAAAH
 T G A C C T A G T C A G T G C A C A T G T C A G T C A G T C G A T C G A T C G A A C G T
A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T

PB0204.1_Zfp740_2/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CGGAGGGAAA--
ANTNCCGGGGGGAANTT
 A C G T A C G T A C G T A C G T A C G T T G A C C T A G T C A G T G C A C A T G T C A G T C A G T C G A T C G A T C G A A C G T A C G T
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGGAGGGAAA--
GAAAGTGAAAGT
 T G A C C T A G T C A G T G C A C A T G T C A G T C A G T C G A T C G A T C G A A C G T A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T