Information for 10-CTCTTCAGAGCGG (Motif 15)

A G T C A C G T A T G C A C G T A C G T A G T C C G T A A C T G C G T A A C T G T G A C A C T G C T A G
Reverse Opposite:
A G T C A G T C A C T G A G T C A C G T A G T C A C G T A C T G C G T A C G T A A T C G C G T A A C T G
p-value:1e-7
log p-value:-1.768e+01
Information Content per bp:1.940
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.0 +/- 19.3bp
Average Position of motif in Background54.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CTCTTCAGAGCGG---
TCNCTTTACAGCGNNNT
 A C G T A G T C A C G T A T G C A C G T A C G T A G T C C G T A A C T G C G T A A C T G T G A C A C T G C T A G A C G T A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CTCTTCAGAGCGG
-ACATCAAAGG--
 A G T C A C G T A T G C A C G T A C G T A G T C C G T A A C T G C G T A A C T G T G A C A C T G C T A G
A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CTCTTCAGAGCGG
NSCACTYVAV-----
 A C G T A C G T A G T C A C G T A T G C A C G T A C G T A G T C C G T A A C T G C G T A A C T G T G A C A C T G C T A G
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CTCTTCAGAGCGG---
TCNNTTTACAGCGNNNT
 A C G T A G T C A C G T A T G C A C G T A C G T A G T C C G T A A C T G C G T A A C T G T G A C A C T G C T A G A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CTCTTCAGAGCGG---
TCNNTTTACAGCGNNNT
 A C G T A G T C A C G T A T G C A C G T A C G T A G T C C G T A A C T G C G T A A C T G T G A C A C T G C T A G A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CTCTTCAGAGCGG
RSCACTYRAG-----
 A C G T A C G T A G T C A C G T A T G C A C G T A C G T A G T C C G T A A C T G C G T A A C T G T G A C A C T G C T A G
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T A C G T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CTCTTCAGAGCGG
GCTATTTATAGC--
 A C G T A G T C A C G T A T G C A C G T A C G T A G T C C G T A A C T G C G T A A C T G T G A C A C T G C T A G
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CTCTTCAGAGCGG
-GCTTCC------
 A G T C A C G T A T G C A C G T A C G T A G T C C G T A A C T G C G T A A C T G T G A C A C T G C T A G
A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CTCTTCAGAGCGG
-ACWTCAAAGG--
 A G T C A C G T A T G C A C G T A C G T A G T C C G T A A C T G C G T A A C T G T G A C A C T G C T A G
A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CTCTTCAGAGCGG
TCTATTTATAGN--
 A C G T A G T C A C G T A T G C A C G T A C G T A G T C C G T A A C T G C G T A A C T G T G A C A C T G C T A G
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T A C G T A C G T