Information for 5-CTGTGAACCG (Motif 23)

A G T C A C G T A C T G A C G T A C T G C G T A C G T A A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G A C G T A C G T A G T C C G T A A G T C C G T A A C T G
p-value:1e-3
log p-value:-9.098e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif8.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.0 +/- 0.0bp
Average Position of motif in Background21.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0109.1_Bbx_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CTGTGAACCG---
NNNNCTGTTAACNNTNN
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C T G C G T A C G T A A G T C A G T C A C T G A C G T A C G T A C G T
A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTGTGAACCG
GCTGTG-----
 A C G T A G T C A C G T A C T G A C G T A C T G C G T A C G T A A G T C A G T C A C T G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGAACCG
GCTGTCAA---
 A C G T A G T C A C G T A C T G A C G T A C T G C G T A C G T A A G T C A G T C A C T G
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CTGTGAACCG
AAGGTGTKAA---
 A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C T G C G T A C G T A A G T C A G T C A C T G
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T

MYBL1/MA0776.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTGTGAACCG-
ACCGTTAACGGT
 A C G T A G T C A C G T A C T G A C G T A C T G C G T A C G T A A G T C A G T C A C T G A C G T
C T G A T G A C T A G C T C A G G A C T G C A T C G T A T C G A G T A C A T C G C A T G G A C T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGAACCG-----
NNNNTGACCCGGCGCG
 A C G T A G T C A C G T A C T G A C G T A C T G C G T A C G T A A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:7
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CTGTGAACCG---
-----AACCGANA
 A G T C A C G T A C T G A C G T A C T G C G T A C G T A A G T C A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGAACCG
CSTGGGAAAD-
 A C G T A G T C A C G T A C T G A C G T A C T G C G T A C G T A A G T C A G T C A C T G
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:9
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------CTGTGAACCG-
AGGACGCTGTAAAGGGA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C T G C G T A C G T A A G T C A G T C A C T G A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

PB0045.1_Myb_1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTGTGAACCG-------
ATGGAAACCGTTATTTT
 A G T C A C G T A C T G A C G T A C T G C G T A C G T A A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C G A T C A T G C A T G G T C A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C A T G C A T G A C T C G A T