Information for 23-CGTCCAATTGGAC (Motif 50)

A G T C A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C T G A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C T G A C T G C G T A A G T C A C T G
p-value:1e-3
log p-value:-7.620e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.26%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.0 +/- 32.5bp
Average Position of motif in Background34.0 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0089.1_Isx/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CGTCCAATTGGAC--
ACNNCTAATTAGNNNN
 A C G T A G T C A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C G T
G C T A A T G C T A C G T G C A G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C T G C T G A A C T G C G A T

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CGTCCAATTGGAC
-AGCCAATCGG--
 A G T C A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C T G A C T G C G T A A G T C
A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CGTCCAATTGGAC
AAATGGACCAATCAG--
 A C G T A C G T A C G T A C G T A G T C A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C T G A C T G C G T A A G T C
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CGTCCAATTGGAC-------
----NNATTGGACTTTNGNN
 A G T C A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

MSX1/MA0666.1/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CGTCCAATTGGAC
---NTAATTGG--
 A G T C A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C T G A C T G C G T A A G T C
A C G T A C G T A C G T A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CGTCCAATTGGAC--
NNTNNACAATGGGANNN
 A C G T A C G T A G T C A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

MSX2/MA0708.1/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CGTCCAATTGGAC
---CCAATTAA--
 A G T C A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C T G A C T G C G T A A G T C
A C G T A C G T A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A A C G T A C G T

ALX3/MA0634.1/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CGTCCAATTGGAC
--TCTAATTAAA-
 A G T C A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C T G A C T G C G T A A G T C
A C G T A C G T G A C T A G T C G A C T C T G A G T C A G C A T G A C T G C T A T C G A T G C A A C G T

PH0033.1_Gbx1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CGTCCAATTGGAC--
TGCCACTAATTAGTGTA
 A C G T A C G T A G T C A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C G T
G C A T C T A G A T G C T G A C T C G A G T A C G A C T G T C A C T G A A G C T A C G T C T G A A C T G A C G T A C T G A C G T G C T A

Lhx8/MA0705.1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CGTCCAATTGGAC
---CTAATTAG--
 A G T C A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C T G A C T G C G T A A G T C
A C G T A C G T A C G T A G T C A G C T T C G A C G T A A C G T A G C T C T G A T C A G A C G T A C G T