Information for 3-GCAGSTCTGCAARAAT (Motif 4)

T A C G G T A C C G T A A C T G A T C G G A C T A T G C A C G T A C T G A G T C C G T A C T G A C T A G T C G A G T C A G C A T
Reverse Opposite:
C G T A A C G T A G C T A G T C A G C T A C G T C T A G A G T C C G T A A T C G C T G A A T G C A G T C A C G T A C T G A T G C
p-value:1e-14
log p-value:-3.277e+01
Information Content per bp:1.769
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.6 +/- 15.6bp
Average Position of motif in Background56.9 +/- 9.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZEB1/MA0103.2/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCAGSTCTGCAARAAT
-CAGGTGAGG------
 T A C G G T A C C G T A A C T G A T C G G A C T A T G C A C G T A C T G A G T C C G T A C T G A C T A G T C G A G T C A G C A T
A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GCAGSTCTGCAARAAT--
---CAATTGCAAAAATAT
 T A C G G T A C C G T A A C T G A T C G G A C T A T G C A C G T A C T G A G T C C G T A C T G A C T A G T C G A G T C A G C A T A C G T A C G T
A C G T A C G T A C G T G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

TBR1/MA0802.1/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCAGSTCTGCAARAAT
--AGGTGTGAAA----
 T A C G G T A C C G T A A C T G A T C G G A C T A T G C A C G T A C T G A G T C C G T A C T G A C T A G T C G A G T C A G C A T
A C G T A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCAGSTCTGCAARAAT
NNCAGGTGCG-------
 A C G T T A C G G T A C C G T A A C T G A T C G G A C T A T G C A C G T A C T G A G T C C G T A C T G A C T A G T C G A G T C A G C A T
G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCAGSTCTGCAARAAT
GCAGCTGTNN------
 T A C G G T A C C G T A A C T G A T C G G A C T A T G C A C G T A C T G A G T C C G T A C T G A C T A G T C G A G T C A G C A T
T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T A C G T A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCAGSTCTGCAARAAT
VCAGGTRDRY------
 T A C G G T A C C G T A A C T G A T C G G A C T A T G C A C G T A C T G A G T C C G T A C T G A C T A G T C G A G T C A G C A T
T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCAGSTCTGCAARAAT
NNCAGGTGTN-------
 A C G T T A C G G T A C C G T A A C T G A T C G G A C T A T G C A C G T A C T G A G T C C G T A C T G A C T A G T C G A G T C A G C A T
G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GCAGSTCTGCAARAAT-------
---NNCCTGNAAAAAAAAAAAAA
 T A C G G T A C C G T A A C T G A T C G G A C T A T G C A C G T A C T G A G T C C G T A C T G A C T A G T C G A G T C A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

NHLH1/MA0048.2/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCAGSTCTGCAARAAT
CGCAGCTGCG-------
 A C G T T A C G G T A C C G T A A C T G A T C G G A C T A T G C A C G T A C T G A G T C C G T A C T G A C T A G T C G A G T C A G C A T
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GCAGSTCTGCAARAAT-------
---NNCCTGNAAAAAAAAAAAAA
 T A C G G T A C C G T A A C T G A T C G G A C T A T G C A C G T A C T G A G T C C G T A C T G A C T A G T C G A G T C A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A