Information for 12-AAGAACAGGGCCA (Motif 33)

C T G A C T G A A C T G C G T A G T C A A T G C C G T A A C T G A C T G C T A G A G T C A T G C C G T A
Reverse Opposite:
A C G T A T C G A C T G A G T C A G T C A G T C C G A T A T C G A C G T A C G T A G T C A G C T A G C T
p-value:1e-9
log p-value:-2.080e+01
Information Content per bp:1.861
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif6.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.7 +/- 15.6bp
Average Position of motif in Background62.0 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AAGAACAGGGCCA
CCAGGAACAG-----
 A C G T A C G T C T G A C T G A A C T G C G T A G T C A A T G C C G T A A C T G A C T G C T A G A G T C A T G C C G T A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAGAACAGGGCCA
GCAAAACATTACTA
 A C G T C T G A C T G A A C T G C G T A G T C A A T G C C G T A A C T G A C T G C T A G A G T C A T G C C G T A
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

PB0200.1_Zfp187_2/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AAGAACAGGGCCA
NNAGGGACAAGGGCNC
 A C G T A C G T A C G T C T G A C T G A A C T G C G T A G T C A A T G C C G T A A C T G A C T G C T A G A G T C A T G C C G T A
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AAGAACAGGGCCA
TGGAACAGMA---
 C T G A C T G A A C T G C G T A G T C A A T G C C G T A A C T G A C T G C T A G A G T C A T G C C G T A
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAGAACAGGGCCA
GGAGAAAGGTGCGA
 A C G T C T G A C T G A A C T G C G T A G T C A A T G C C G T A A C T G A C T G C T A G A G T C A T G C C G T A
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AAGAACAGGGCCA
---AAYTAGGTCA
 C T G A C T G A A C T G C G T A G T C A A T G C C G T A A C T G A C T G C T A G A G T C A T G C C G T A
A C G T A C G T A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:AAGAACAGGGCCA
---CACAGN----
 C T G A C T G A A C T G C G T A G T C A A T G C C G T A A C T G A C T G C T A G A G T C A T G C C G T A
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AAGAACAGGGCCA
-AGGTCAAGGTCA
 C T G A C T G A A C T G C G T A G T C A A T G C C G T A A C T G A C T G C T A G A G T C A T G C C G T A
A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

Nr5a2/MA0505.1/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AAGAACAGGGCCA--
AAGTTCAAGGTCAGC
 C T G A C T G A A C T G C G T A G T C A A T G C C G T A A C T G A C T G C T A G A G T C A T G C C G T A A C G T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:AAGAACAGGGCCA
--WDNCTGGGCA-
 C T G A C T G A A C T G C G T A G T C A A T G C C G T A A C T G A C T G C T A G A G T C A T G C C G T A
A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T