Information for 7-AAGGGTGARAGTC (Motif 26)

G T C A C G T A C A T G A C T G C A T G C G A T A C T G C G T A T C A G C G T A A C T G G A C T A T G C
Reverse Opposite:
T A C G C T G A A G T C G A C T A G T C A C G T A G T C C G T A G T A C G T A C G T A C A C G T A C G T
p-value:1e-10
log p-value:-2.312e+01
Information Content per bp:1.792
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif9.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets44.9 +/- 25.7bp
Average Position of motif in Background56.1 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AAGGGTGARAGTC
GAAAGTGAAAGT-
 G T C A C G T A C A T G A C T G C A T G C G A T A C T G C G T A T C A G C G T A A C T G G A C T A T G C
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AAGGGTGARAGTC-
AGAAAGTGAAAGTGA
 A C G T G T C A C G T A C A T G A C T G C A T G C G A T A C T G C G T A T C A G C G T A A C T G G A C T A T G C A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

Hnf4a/MA0114.3/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AAGGGTGARAGTC----
-GGGGTCAAAGTCCAAT
 G T C A C G T A C A T G A C T G C A T G C G A T A C T G C G T A T C A G C G T A A C T G G A C T A T G C A C G T A C G T A C G T A C G T
A C G T T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AAGGGTGARAGTC
BAGTCATANTGAAAG--
 A C G T A C G T A C G T A C G T G T C A C G T A C A T G A C T G C A T G C G A T A C T G C G T A T C A G C G T A A C T G G A C T A T G C
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AAGGGTGARAGTC------
---GGCAAAAGTCCAATAA
 G T C A C G T A C A T G A C T G C A T G C G A T A C T G C G T A T C A G C G T A A C T G G A C T A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAGGGTGARAGTC--
CANAGNNCAAAGTCCA
 A C G T G T C A C G T A C A T G A C T G C A T G C G A T A C T G C G T A T C A G C G T A A C T G G A C T A T G C A C G T A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AAGGGTGARAGTC--
--AGGTGNCAGACAG
 G T C A C G T A C A T G A C T G C A T G C G A T A C T G C G T A T C A G C G T A A C T G G A C T A T G C A C G T A C G T
A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:8
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----AAGGGTGARAGTC
WNAGTCADAVTGAAACTN
 A C G T A C G T A C G T A C G T A C G T G T C A C G T A C A T G A C T G C A T G C G A T A C T G C G T A T C A G C G T A A C T G G A C T A T G C
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AAGGGTGARAGTC-
--AGGTGHCAGACA
 G T C A C G T A C A T G A C T G C A T G C G A T A C T G C G T A T C A G C G T A A C T G G A C T A T G C A C G T
A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

HNF4G/MA0484.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAGGGTGARAGTC--
AGAGTCCAAAGTCCA
 G T C A C G T A C A T G A C T G C A T G C G A T A C T G C G T A T C A G C G T A A C T G G A C T A T G C A C G T A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A